Chr:
Chr10
Start:
9992222
End:
9992975
Strand:
-
Ref_name:
LOC107277495
Sequence
(XR_001540491.2):
UAGUCAAAUGAUGACUUCUAUGUUAUUGUCAUUGCUGAUGUUCUGGAUAUAUUUAAUAUUUUGUUUCCUAGCUAAACAAUAAGUGCAGUAAGAAUUAUAGGUAGAGCCCCGCAAAAAAAAAAAAAGAAUUAUAGGUAGAGAACAGCUAUAGCAAGGCUCUCCUAUCUUAUAUAUAGAAAGAAGAGGUAGCAGGAAACCACAUCCCUUCUUCAACGAUGGAAGUAAGAUCUUUAAAUUUGUGCUUCCUCUUGGUUCUUGUUUUGCUUAUGAGUCCAGCGCCAACGGCAGUAGCUUUUUCCCCAGAGGAUUGCCUCGAUGAUGUUGGCUGGAUACUCAUCUGCACAAAACCGACAUGCAAAUUUAGCUGCUGGACUUCACGCUCUGUGAACAAGGGGAGGAAAAUGCAGGACUACUGGUGCAGUGAUUCGAACACCUGCCACUGCGUCUUUUGCACCGGCGACUAAGAAUUCAGUGGCUGUCUUGAUAUCCCACAAGAUGUAGCAGCAUGAAUAUCCAAGGGAAUAAUCAAUAAUAAACUUGUUGCUUGCAUCACCUGGAGCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
80.89%
ME_num:
MEP:
16.26%
HE_num:
HEP:
2.64%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
endosprem
Tau :
0.95
Avg Expression:
64.33
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | 3.09246064910547 | 0.0142921167158569 |