Chr:
Chr11
Start:
28604630
End:
28605746
Strand:
+
Ref_name:
LOC107277388
Sequence
(XR_001541322.2):
CCCUUCCAGGCUUUGCUGCAAGCAACCAAAACGUAUAGAAAGCAAGGAUGUCGUCGUACUUCCAGACCACUCAACCGUUUAGUAGGACUUACAAGAUCGGUAAACCCAAGGGCGGCGGGGACGGGCAGGGAGCUGAGGGAAAACAAGGAUCCGACGGUGCAGGCCGGCCGCGCGUGCGGAUAAUCACACACAACAACGACCACGAACCACGAGUCGUGCAGCACGAACAAGCUCCAGCUUCAUCUCCGGCUCCGGCCCCCGUCUCCUACUGAAUCAACUAGCAAUCAACCAACGCAUCCAUCGUAUAGAUCCGUCCAUCCCGUCAUGCACGCGUAAGUGGCACUAAAUAGUACUCCUACUCCGUAAAUAUUUCCUCAUUCCCUAAAUAUGUUUGACAUCGUUGACUUUUUUAAACAUGUUUGUUCGUUUUAUUCAAAAACUUUUGUAAUAUGUGUAAAACUAUAUGUAUACAUAAAAGUAUAUUUAACAAUAAAUCAAAUGAUAGAAAAAAAAUUAACAAUUACUUAAAUUUUUUAAAUAAGACGAACGAUCAAACAUUUUUAAAAAAAGUCAACGGCGUCAAACAUUUUAGAAUGAAGGUAGUCCUAAAAUCACCGCAAUGGUACGCACAAUAAGAUGAGCAGAUAAUUGGGACAUACGUACGUUCGUACACCUGCUAGUUGCGCUGCUCCCCCGUAGUUUCGACCGGCUUCCCGUGAGAUCGAAUAGCAUGCGGCCCAGCAUGCAUAUGUGUAAUAUGUCUUUGUAAAUGUAAACUAUAAUAAAGACUACUUUAUAGCCAAUGUAAUAGCCAAUUCAUAUAAUAGUUGUUUACUAUACUAUUAAUAUCUGGUCCCACCUAUCAUACACAUAUUACGUCUUAGAGUCCAUCCUGCAGCUAGCUACAGAUCUAUAGCCCGCUGUUCUUCUUUUUCUUCCUUUACCUCUUUAAAAUAUGUUUACAGCUAGCUUAAAGCCUGCUAUUGUACCUGCUCUUACUAUUCGUGUGUAUGGCAAAUCACGGCGGCCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
54.07%
ME_num:
MEP:
20.73%
HE_num:
HEP:
25.0%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
2nd_leaf
Tau :
0.91
Avg Expression:
152.92
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Vialone_Nano // root // control--/--Vialone_Nano // root // 100 mM NaCl | 4.59055655800882 | 0.00931227923025475 |
| 2 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | 6.94191416159006 | 1.89128523521894e-06 |
| 3 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | -4.36911128145013 | 0.042458688451663 |
| 4 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 2.0717776449105 | 0.0111903586478589 |
| 5 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | 2.65847645204266 | 0.0109759901825524 |
| 6 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | 4.25739916354207 | 0.00719825438035971 |