Chr:
Chr6
Start:
19145615
End:
19158552
Strand:
-
Ref_name:
LOC107276770
Sequence
(XR_001546644.2):
GUCGCCAUUGCAUUGCUAAUGCUACUAUAUACAUAUGCAUAUAUAGUUUUCUAGCUAGAUCAAGUAAGUUUUGAGCGAGCAAGCAAGUUAGGUAGUAGCGCUAUACCUUGAAAAUUAGGUAAUUAAUUAAGAUGGCCGGAGAUUCGCCGGAGGCGCCGGUCGGGCAGGCAUGAACCACCGGCCUCUGCGACUGCUGCGACGACUGCAACAGCUGUUGCCUGACGUUCUUCUGCCCGUGCGUUGCCUUCGGCCUUAUCGCCGAGACCCUCGACAGGGGCAGCAUCUCUUGCGCCAUAGCAGGCAUCACCUACUGCUGGAUGCGGCCGAGCACGGUGCUCCCAGGCAUGCACACCAUGUACUCUUGGUCCUACCGCCAGAAGCUCCGCGCCACGUUCGGCAUGGCGCCGGAGCCCUGCGCCGACUGCUGUCUGCAGCUCUUCUGUGACAGAUGUUCCCUCAGCCAGAUGUACCGCGAGCUCAAGAACCGUGGCGUCAACCCUGCCAAUGACGCUGCAGCUUCGGAAGAUCCGCUCUUCGUGGAAGUUGAAGCCGACGUUUGGGAAAGCG
Sequence
(XR_003242781.1):
GUCGCCAUUGCAUUGCUAAUGCUACUAUAUACAUAUGCAUAUAUAGUUUUCUAGCUAGAUCAAGUAAGUUUUGAGCGAGCAAGCAAGUUAGGUAGUAGCGCUAUACCUUGAAAAUUAGGUAAUUAAUUAAGAUGGCCGGAGAUUCGCCGGAGGCGCCGGUCGGGCAGGCAUGAACCACCGGCCUCUGCGACUGCUGCGACGACUGCAACAGCUGUUGCCUGACGUUCUUCUGCCCGUGCGUUGCCUUCGGCCUUAUCGCCGAGACCCUCGACAGGGGCAGCAUCUCUUGCGCCAUAGCAGGCAUCACCUACUGCUGGAUGCGGCCGAGCACGGUGCUCCCAGGCAUGCACACCAUGUACUCUUGGUCCUACCGCCAGAAGCUCCGCGCCACGUUCGGCAUGGCGCCGGAGCCCUGCGCCGACUGCUGUCUGCAGCUCUUCUGUGACAGAUGUUCCCUCAGCCAGAUGUACCGCGAGCUCAAGAACCGUGGCGUCAACCCUGCCAAUGGUAAUUAAACCCGGCUCACGCCUUACCAUAUUCUACAUUAAUUAUAUAUUUUUAACAAUGAUAGAAUUAUGUAAACUGUUACAUUGAUCUCGUCCUUGUUUUAAUUAAUAUUCCACCACAUAACCCAUUUUAUUGUAAAAUCUCAAUCAUCCAAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
51.02%
ME_num:
MEP:
28.66%
HE_num:
HEP:
20.12%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.94
Avg Expression:
27.82
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // No_DIS;Fr13_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -2.12860842952836 | 0.00403225343901416 |
| 2 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -3.89284951072559 | 2.75928177190835e-11 |
| 3 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 1h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 1h50 min" | -1.46850775955609 | 0.00735784701786814 |
| 4 | Nipponbare // root // "mock,7_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),7_days" | -3.8402813422134 | 0.025362248762741 |
| 5 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_BLS256 | -3.39459784396872 | 1.81881809572026e-07 |
| 6 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_BLS279 | -1.97886540301047 | 0.000844949207695198 |
| 7 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_L8 | -1.55604632355535 | 0.0425588635179446 |
| 8 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_B8_12 | -2.10469584311427 | 5.42102284085279e-08 |
| 9 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_RS105 | -1.64965736086453 | 4.58129035107611e-05 |
| 10 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7341 | -2.24482750117022 | 3.12223155338031e-05 |
| 11 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7331 | -2.18729307967322 | 0.00103389254980843 |
| 12 | Nipponbare // leaf // "wild_type,control,2"--/--Nipponbare // leaf // "wild_type,drought,2" | -3.89503982104521 | 2.97609373925383e-14 |
| 13 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_CFBP7342 | -2.41808729080051 | 8.87828570125438e-07 |
| 14 | Nipponbare // leaf // control--/--Nipponbare // leaf // drought | -3.89508100895966 | 2.58432494205463e-14 |
| 15 | Nipponbare // leaf // "wild_type,control,1"--/--Nipponbare // leaf // "wild_type,drought,1" | -3.89517293286579 | 3.02747586566234e-14 |
| 16 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -6.2042986273928 | 1.42208111239938e-59 |
| 17 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | -2.00564591280538 | 6.02049117285964e-06 |
| 18 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -2.75039922882699 | 2.2194075862671e-18 |
| 19 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Watered;Short_Day | -2.41198192716177 | 3.67298875823263e-13 |
| 20 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -3.15129115596615 | 6.03283187665115e-05 |