| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 114.47 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 68.82 | HC |
| SRR8258050 | leaf_sheath | R_bph | 102.94 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 147.22 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 91.00 | HC |
| SRR7058097 | leaf | rice_mock | 137.37 | HC |
| SRR7058098 | leaf | rice_RSV | 111.71 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 53.87 | HC |
| SRR2154077 | seedling | KDM105_seedling | 50.34 | HC |
| SRR2154074 | seed | Nipponbare_seed | 349.12 | HC |
| SRR2154072 | seed | Rathuwee_seed | 13.69 | HC |
| SRR2154070 | seed | Guangluai4_seed | 7.20 | HC |
| SRR2154071 | seed | KDM105_seed | 31.55 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 6.11 | HC |
| SRR447128 | root | As(III) 20 uM | 319.69 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 74.40 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 85.00 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 135.47 | HC |
| SRR1013787 | panicle | PA64s_PA | 71.66 | HC |
| SRR1013788 | panicle | LYP9_PA | 27.19 | HC |
| SRR9070101 | shoot_base | WT_base | 58.87 | HC |
| SRR089619 | panicle | control | 8.63 | HC |
| SRR447135 | shoot | As(III) 20 uM | 97.56 | HC |
| SRR447134 | shoot | As(III) 80 uM | 1177.22 | HC |
| SRR447133 | shoot | As(III) 20 uM | 42.06 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 89.41 | HC |
| SRR447131 | root | As(III) 80 uM | 10.19 | HC |
| SRR447130 | root | As(III) 20 uM | 335.65 | HC |
| SRR1849765 | leaf | Control 30min | 50.45 | HC |
| SRR1849767 | leaf | Control 30min | 37.16 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 50.66 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 54.48 | HC |
| SRR6498701 | leaf | "WT, Control" | 53.45 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 61.95 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 9.38 | HC |
| SRR3203907 | leaf | WT | 25.01 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 39.91 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 10.11 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 5.41 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 6.63 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 14.96 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 8.79 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 12.97 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 23.80 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 104.86 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 86.22 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 77.04 | HC |
| SRR447129 | root | As(III) 80 uM | 10.31 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 45.91 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 60.16 | HC |
| SRR1849773 | leaf | Control 120min | 63.67 | HC |
| SRR1849772 | leaf | Control 120min | 36.03 | HC |
| SRR1849771 | leaf | Control 120min | 60.75 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 44.32 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 34.09 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 22.64 | HC |
| SRR3130370 | leaf | control 8 hour | 37.71 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 31.63 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 12.96 | HC |
| SRR7058096 | leaf | rice_mock | 204.14 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 6.99 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 778.86 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 40.16 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 78.07 | HC |
| SRR447136 | shoot | As(III) 80 uM | 63.56 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 72.09 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 36.27 | HC |
| SRR2154075 | seed | Taipei309_seed | 379.47 | HC |
| SRR976171 | lamina_joint | wild type | 28.31 | HC |
| SRR4098209 | leaf | No treatment | 27.40 | HC |
| SRR3130369 | leaf | control 8 hour | 28.00 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 29.52 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 61.64 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 88.72 | HC |
| SRR9070100 | shoot_base | WT_base | 65.59 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 74.75 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 73.75 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 85.96 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 73.95 | HC |
| SRR3130365 | leaf | control 0 hour | 31.17 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 56.96 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 22.99 | HC |
| SRR3130366 | leaf | control 0 hour | 33.53 | HC |
| SRR2862364 | leaf | mock leaf cells | 63.23 | HC |
| SRR2862365 | leaf | mock leaf cells | 62.08 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 218.11 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 118.70 | HC |
| SRR2862363 | leaf | mock leaf cells | 227.11 | HC |
| SRR8649147 | panicle | panicle tissue | 39.40 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 82.32 | HC |
| SRR9070102 | shoot_base | WT_base | 50.29 | HC |
| SRR6498699 | leaf | "WT, Control" | 42.91 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 78.93 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 65.72 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 23.45 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 72.11 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 18.77 | HC |
| SRR4098203 | seedling | No treatment | 24.76 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 10.17 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 70.10 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 57.33 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 12.00 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 113.30 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 121.31 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 8.30 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 9.25 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 10.30 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 8.54 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 9.07 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 7.46 | HC |
| SRR3110556 | shoot | shoot control | 72.76 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 60.29 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 64.23 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 87.63 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 38.84 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 49.03 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 59.18 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 49.57 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 17.73 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 79.02 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 17.30 | HC |
| SRR2544786 | embryo | dry seed | 10.60 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 62.45 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 66.04 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 73.77 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 119.38 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 11.13 | HC |
| SRR8258048 | leaf_sheath | R_bph | 105.47 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 800.87 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 65.96 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 23.38 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 91.15 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 25.35 | HC |
| SRR1654490 | leaf | wild type | 362.24 | HC |
| SRR3110557 | shoot | shoot treated | 78.31 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 9.74 | HC |
| SRR8258051 | leaf_sheath | R_bph | 82.84 | HC |
| SRR504362 | leaf | NPB X 93-11 | 64.28 | HC |