| SRR3140955 | leaf | "45C, 12h" | 0.20 | MC |
| SRR8258050 | leaf_sheath | R_bph | 1.36 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 1.98 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 0.65 | MC |
| SRR10690152 | leaf | IRBB5_0h | 0.70 | MC |
| SRR7058097 | leaf | rice_mock | 0.99 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1.55 | MC |
| SRR7058098 | leaf | rice_RSV | 1.24 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 2.70 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 0.83 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 9.73 | MC |
| SRR2154077 | seedling | KDM105_seedling | 5.49 | MC |
| SRR2154074 | seed | Nipponbare_seed | 3.06 | MC |
| SRR10690151 | leaf | IRBB5_0h | 1.12 | MC |
| SRR2154072 | seed | Rathuwee_seed | 2.96 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 5.47 | MC |
| SRR2154070 | seed | Guangluai4_seed | 0.93 | MC |
| SRR2154071 | seed | KDM105_seed | 1.53 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.83 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2.39 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 0.78 | MC |
| SRR1061620 | flag_leaf | Normal | 0.72 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2.38 | MC |
| SRR10704058 | leaf | Glyphosate | 1.63 | MC |
| SRR447128 | root | As(III) 20 uM | 0.34 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.92 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 0.60 | MC |
| SRR1013787 | panicle | PA64s_PA | 3.25 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 2.32 | MC |
| SRR1013789 | panicle | 93-11_PA | 0.43 | MC |
| SRR1013788 | panicle | LYP9_PA | 1.94 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 6.51 | MC |
| SRR447131 | root | As(III) 80 uM | 0.68 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 2.41 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 2.39 | MC |
| SRR6498701 | leaf | "WT, Control" | 1.54 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 2.55 | MC |
| SRR3203907 | leaf | WT | 9.23 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1.03 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 0.60 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 0.61 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 0.61 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 0.70 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 0.29 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.47 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.65 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 0.20 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 0.35 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 0.60 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 2.20 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.30 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 1.26 | MC |
| SRR1849773 | leaf | Control 120min | 1.65 | MC |
| SRR1849771 | leaf | Control 120min | 1.47 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 1.58 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 11.05 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 3.21 | MC |
| SRR3130370 | leaf | control 8 hour | 8.29 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 7.64 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 4.47 | MC |
| SRR7058096 | leaf | rice_mock | 0.49 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.19 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 0.59 | MC |
| SRR2154075 | seed | Taipei309_seed | 5.15 | MC |
| SRR976171 | lamina_joint | wild type | 3.37 | MC |
| SRR4098208 | root | No treatment | 0.81 | MC |
| SRR4098209 | leaf | No treatment | 0.40 | MC |
| SRR3130369 | leaf | control 8 hour | 5.48 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 7.09 | MC |
| SRR9070100 | shoot_base | WT_base | 0.18 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 1.66 | MC |
| SRR3130365 | leaf | control 0 hour | 6.09 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.56 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 5.23 | MC |
| SRR3130366 | leaf | control 0 hour | 7.12 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 0.14 | MC |
| SRR2862364 | leaf | mock leaf cells | 18.87 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 18.55 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 7.36 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 0.78 | MC |
| SRR2862363 | leaf | mock leaf cells | 16.97 | MC |
| SRR8649147 | panicle | panicle tissue | 0.31 | MC |
| SRR10704057 | leaf | CK | 0.65 | MC |
| SRR10704056 | leaf | CK | 0.32 | MC |
| SRR10704059 | leaf | Glyphosate | 0.90 | MC |
| SRR9070102 | shoot_base | WT_base | 0.23 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 13.47 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.40 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.73 | MC |
| SRR10690144 | leaf | IR24_0h | 0.69 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.92 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.41 | MC |
| SRR10690143 | leaf | IR24_0h | 0.33 | MC |
| SRR10690142 | leaf | IR24_0h | 0.55 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.66 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1.64 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.96 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 0.42 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 0.30 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 0.75 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 0.44 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 0.39 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 0.45 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1.99 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.31 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 0.93 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 0.61 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 1.66 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 1.17 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 0.38 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.20 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.23 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.77 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.56 | MC |
| SRR10690153 | leaf | IRBB5_0h | 0.55 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.65 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.33 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 0.60 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.43 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 0.24 | MC |
| SRR3110556 | shoot | shoot control | 2.46 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 1.05 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 3.54 | MC |
| SRR1061617 | panicle | Heat Stress | 0.18 | MC |
| SRR1061615 | panicle | Heat Stress | 0.22 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 0.24 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.48 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 0.89 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 1.28 | MC |
| SRR1061618 | flag_leaf | Normal | 0.34 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 0.80 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 0.91 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 0.68 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 0.88 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.35 | MC |
| SRR3140954 | leaf | "45C, 12h" | 0.40 | MC |
| SRR089621 | panicle | cold | 0.80 | MC |
| SRR089620 | panicle | drought | 0.63 | MC |
| SRR3140957 | leaf | "45C, 24h" | 0.48 | MC |
| SRR089622 | panicle | salt | 1.97 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 0.57 | MC |
| SRR2544786 | embryo | dry seed | 0.34 | MC |
| SRR4098172 | seedling | Cold (4C) | 0.48 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.12 | MC |
| SRR3140953 | leaf | "45C, 0h" | 0.23 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 1.30 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 0.84 | MC |
| SRR8258048 | leaf_sheath | R_bph | 3.35 | MC |
| SRR1740024 | seedling | N22-Control | 0.43 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 0.39 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 0.43 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 1.58 | MC |
| SRR1654490 | leaf | wild type | 7.30 | MC |
| SRR3110557 | shoot | shoot treated | 2.28 | MC |
| SRR5940086 | panicle | Wild type | 0.26 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.28 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1.68 | MC |
| SRR8258051 | leaf_sheath | R_bph | 2.10 | MC |
| SRR504362 | leaf | NPB X 93-11 | 3.50 | MC |