| SRR3140955 | leaf | "45C, 12h" | 0.40 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 0.30 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 4.44 | MC |
| SRR6810106 | panicle | panicle | 3.88 | MC |
| SRR7058097 | leaf | rice_mock | 15.74 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.41 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.84 | MC |
| SRR7058098 | leaf | rice_RSV | 19.12 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 0.41 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 1.46 | MC |
| SRR2154077 | seedling | KDM105_seedling | 3.34 | MC |
| SRR2154074 | seed | Nipponbare_seed | 3.85 | MC |
| SRR2154072 | seed | Rathuwee_seed | 2.55 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 1.26 | MC |
| SRR2154070 | seed | Guangluai4_seed | 1.50 | MC |
| SRR2154071 | seed | KDM105_seed | 1.26 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 3.99 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 3.89 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 5.75 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 5.67 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 0.43 | MC |
| SRR504363 | leaf | 93-11 X NPB | 0.95 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 1.63 | MC |
| SRR1013789 | panicle | 93-11_PA | 3.02 | MC |
| SRR1013788 | panicle | LYP9_PA | 4.36 | MC |
| SRR9070101 | shoot_base | WT_base | 0.30 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 4.96 | MC |
| SRR6810105 | panicle | panicle | 4.71 | MC |
| SRR447135 | shoot | As(III) 20 uM | 12.51 | MC |
| SRR447134 | shoot | As(III) 80 uM | 6.98 | MC |
| SRR447133 | shoot | As(III) 20 uM | 10.92 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 2.76 | MC |
| SRR1849765 | leaf | Control 30min | 13.06 | MC |
| SRR1849767 | leaf | Control 30min | 23.12 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 12.07 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 2.63 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 20.95 | MC |
| SRR6498701 | leaf | "WT, Control" | 22.47 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 7.45 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 4.98 | MC |
| SRR3203907 | leaf | WT | 14.35 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 12.52 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 3.56 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 5.68 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1.60 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 3.52 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 6.10 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 3.91 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 7.53 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 8.67 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 2.12 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 5.19 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.51 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 6.74 | MC |
| SRR447129 | root | As(III) 80 uM | 5.75 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 7.63 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 10.07 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 7.98 | MC |
| SRR1849773 | leaf | Control 120min | 13.18 | MC |
| SRR1849772 | leaf | Control 120min | 7.94 | MC |
| SRR1849771 | leaf | Control 120min | 15.79 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 23.20 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 6.30 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 2.79 | MC |
| SRR3130370 | leaf | control 8 hour | 7.33 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 5.08 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 1.58 | MC |
| SRR7058096 | leaf | rice_mock | 17.23 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 2.15 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3.40 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 8.23 | MC |
| SRR6365689 | seedling | Wild type | 3.33 | MC |
| SRR447136 | shoot | As(III) 80 uM | 1.32 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 5.57 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 5.20 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 8.20 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 0.78 | MC |
| SRR2154075 | seed | Taipei309_seed | 2.13 | MC |
| SRR3140952 | leaf | "45C, 0h" | 0.39 | MC |
| SRR4098208 | root | No treatment | 10.94 | MC |
| SRR3130369 | leaf | control 8 hour | 5.21 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 4.75 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3.11 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.94 | MC |
| SRR9070100 | shoot_base | WT_base | 0.18 | MC |
| SRR4098205 | seedling | Heat (50C) | 5.14 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 7.32 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2.28 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 5.56 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 4.51 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 3.93 | MC |
| SRR3130365 | leaf | control 0 hour | 6.99 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4.19 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 3.46 | MC |
| SRR3130366 | leaf | control 0 hour | 5.96 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 2.49 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 2.30 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 5.29 | MC |
| SRR2862364 | leaf | mock leaf cells | 2.79 | MC |
| SRR2862365 | leaf | mock leaf cells | 3.09 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 9.28 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 1.92 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 9.05 | MC |
| SRR2862363 | leaf | mock leaf cells | 9.00 | MC |
| SRR8649147 | panicle | panicle tissue | 2.21 | MC |
| SRR10704055 | leaf | CK | 8.53 | MC |
| SRR10704056 | leaf | CK | 14.79 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.80 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 3.82 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 2.82 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 4.23 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 4.07 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3.86 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 5.39 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 2.72 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 2.20 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 3.04 | MC |
| SRR4098203 | seedling | No treatment | 2.86 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 1.64 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 3.08 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 1.55 | MC |
| SRR6365690 | seedling | Wild type | 1.40 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 2.27 | MC |
| SRR6365692 | panicle | Wild type | 2.86 | MC |
| SRR6365693 | panicle | Wild type | 4.64 | MC |
| SRR6365694 | panicle | Wild type | 4.21 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 2.57 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 4.18 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 2.76 | MC |
| SRR6810101 | seedling | seedling | 13.99 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 1.53 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 4.26 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 0.51 | MC |
| SRR1849784 | root | Control 120min | 6.27 | MC |
| SRR6365691 | panicle | Wild type | 2.61 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 4.06 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 1.50 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 2.90 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 4.79 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 4.49 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 6.99 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3.22 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 5.40 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 7.00 | MC |
| SRR1061618 | flag_leaf | Normal | 15.26 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6.26 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 5.76 | MC |
| SRR3140954 | leaf | "45C, 12h" | 0.87 | MC |
| SRR3140957 | leaf | "45C, 24h" | 2.86 | MC |
| SRR504360 | leaf | Nipponbare | 2.30 | MC |
| SRR4098172 | seedling | Cold (4C) | 6.09 | MC |
| SRR3140956 | leaf | "45C, 24h" | 4.87 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6.05 | MC |
| SRR3140953 | leaf | "45C, 0h" | 1.36 | MC |
| SRR6810102 | seedling | seedling | 23.29 | MC |
| SRR10956502 | panicle | WT | 3.75 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 3.84 | MC |
| SRR10956501 | panicle | WT | 3.77 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 4.01 | MC |
| SRR1740023 | seedling | IR64-Control | 9.64 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 0.85 | MC |
| SRR1740025 | seedling | PK-Control | 8.54 | MC |
| SRR1740024 | seedling | N22-Control | 20.07 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 6.92 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 3.40 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 4.97 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 4.75 | MC |
| SRR1654490 | leaf | wild type | 11.92 | MC |
| SRR3110557 | shoot | shoot treated | 27.87 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 3.13 | MC |