| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 941.19 | HC |
| SRR3140955 | leaf | "45C, 12h" | 39.28 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 1794.70 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 71.86 | HC |
| SRR8258050 | leaf_sheath | R_bph | 1993.95 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 470.45 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 1584.53 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 981.11 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 656.86 | HC |
| SRR10690152 | leaf | IRBB5_0h | 4060.99 | HC |
| SRR6810106 | panicle | panicle | 87.06 | HC |
| SRR7058097 | leaf | rice_mock | 178.95 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 123.58 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 199.00 | HC |
| SRR7058098 | leaf | rice_RSV | 283.36 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 3500.01 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 114.64 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 239.06 | HC |
| SRR2154077 | seedling | KDM105_seedling | 217.96 | HC |
| SRR2154074 | seed | Nipponbare_seed | 75.68 | HC |
| SRR10690151 | leaf | IRBB5_0h | 2806.73 | HC |
| SRR2154072 | seed | Rathuwee_seed | 65.83 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 135.08 | HC |
| SRR2154070 | seed | Guangluai4_seed | 56.72 | HC |
| SRR2154071 | seed | KDM105_seed | 30.96 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 49.51 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 3950.46 | HC |
| SRR1061625 | panicle | Heat Stress | 78.04 | HC |
| SRR1061624 | panicle | Normal | 211.90 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 357.97 | HC |
| SRR1061622 | flag_leaf | Normal | 505.22 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 753.17 | HC |
| SRR1061620 | flag_leaf | Normal | 618.22 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5253.91 | HC |
| SRR10704058 | leaf | Glyphosate | 1437.17 | HC |
| SRR447128 | root | As(III) 20 uM | 150.73 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 4989.52 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 190.16 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 81.75 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 220.61 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 219.61 | HC |
| SRR1013787 | panicle | PA64s_PA | 575.89 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 148.81 | HC |
| SRR504363 | leaf | 93-11 X NPB | 400.31 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 590.43 | HC |
| SRR1013789 | panicle | 93-11_PA | 159.12 | HC |
| SRR1013788 | panicle | LYP9_PA | 240.25 | HC |
| SRR9070101 | shoot_base | WT_base | 10.35 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 830.75 | HC |
| SRR6810105 | panicle | panicle | 82.56 | HC |
| SRR089619 | panicle | control | 118.27 | HC |
| SRR447135 | shoot | As(III) 20 uM | 287.13 | HC |
| SRR447134 | shoot | As(III) 80 uM | 572.25 | HC |
| SRR447133 | shoot | As(III) 20 uM | 535.58 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 1021.75 | HC |
| SRR447131 | root | As(III) 80 uM | 213.23 | HC |
| SRR447130 | root | As(III) 20 uM | 839.37 | HC |
| SRR1849765 | leaf | Control 30min | 328.03 | HC |
| SRR1849767 | leaf | Control 30min | 535.42 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 78.92 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 538.79 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 40.44 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1028.93 | HC |
| SRR6498701 | leaf | "WT, Control" | 763.28 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 982.94 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 11528.68 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 291.78 | HC |
| SRR3203907 | leaf | WT | 1011.63 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 895.88 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 2418.07 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 1789.07 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 373.78 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 792.39 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 272.06 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 445.53 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 1523.16 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 864.31 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1098.33 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 2234.04 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 4452.58 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 75.76 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 73.98 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 100.20 | HC |
| SRR447129 | root | As(III) 80 uM | 404.59 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 148.73 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 423.08 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 532.40 | HC |
| SRR1849773 | leaf | Control 120min | 663.57 | HC |
| SRR1849772 | leaf | Control 120min | 423.18 | HC |
| SRR1849771 | leaf | Control 120min | 499.48 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 543.71 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 757.09 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 246.49 | HC |
| SRR3130370 | leaf | control 8 hour | 471.20 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 531.86 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 272.87 | HC |
| SRR7058096 | leaf | rice_mock | 149.45 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 32.50 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 58.92 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 291.02 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 262.05 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 77.56 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 458.15 | HC |
| SRR6365689 | seedling | Wild type | 47.94 | HC |
| SRR447136 | shoot | As(III) 80 uM | 655.36 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 42.07 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 474.13 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 622.96 | HC |
| SRR10704060 | leaf | Glyphosate | 1217.11 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 550.25 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 120.98 | HC |
| SRR2154075 | seed | Taipei309_seed | 76.25 | HC |
| SRR3140952 | leaf | "45C, 0h" | 93.13 | HC |
| SRR976171 | lamina_joint | wild type | 455.85 | HC |
| SRR4098208 | root | No treatment | 60.56 | HC |
| SRR4098209 | leaf | No treatment | 154.60 | HC |
| SRR3130369 | leaf | control 8 hour | 447.77 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 322.20 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 109.46 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 75.08 | HC |
| SRR9070100 | shoot_base | WT_base | 8.66 | HC |
| SRR4098205 | seedling | Heat (50C) | 77.34 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 881.95 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 99.91 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 60.23 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 63.77 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 116.57 | HC |
| SRR3130365 | leaf | control 0 hour | 577.37 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 102.50 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 295.78 | HC |
| SRR3130366 | leaf | control 0 hour | 512.45 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 67.30 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 62.24 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 38.28 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 28.66 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 31.98 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 29.15 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 64.54 | HC |
| SRR2862364 | leaf | mock leaf cells | 110.39 | HC |
| SRR2862365 | leaf | mock leaf cells | 86.11 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 2885.47 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 118.21 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 207.52 | HC |
| SRR2862363 | leaf | mock leaf cells | 2958.23 | HC |
| SRR8649147 | panicle | panicle tissue | 43.09 | HC |
| SRR4098207 | panicle | No treatment | 116.20 | HC |
| SRR10704055 | leaf | CK | 437.67 | HC |
| SRR10704057 | leaf | CK | 1302.01 | HC |
| SRR10704056 | leaf | CK | 502.30 | HC |
| SRR10704059 | leaf | Glyphosate | 233.28 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 462.13 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 69.46 | HC |
| SRR9070102 | shoot_base | WT_base | 6.65 | HC |
| SRR6498699 | leaf | "WT, Control" | 737.42 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 200.12 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 286.95 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 67.45 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 4841.05 | HC |
| SRR10690144 | leaf | IR24_0h | 5285.50 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 4841.14 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 6455.76 | HC |
| SRR10690143 | leaf | IR24_0h | 4508.19 | HC |
| SRR10690142 | leaf | IR24_0h | 5280.21 | HC |
| SRR2646852 | panicle | FP | 63.07 | HC |
| SRR2646853 | panicle | FP | 79.56 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 69.31 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 59.39 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 4688.29 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 6229.38 | HC |
| SRR2646854 | panicle | SP | 48.19 | HC |
| SRR2646855 | panicle | SP | 70.91 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 172.66 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 210.85 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 284.25 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 213.92 | HC |
| SRR4098203 | seedling | No treatment | 59.19 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 170.03 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 180.39 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 158.00 | HC |
| SRR6365690 | seedling | Wild type | 46.82 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 93.14 | HC |
| SRR6365692 | panicle | Wild type | 133.38 | HC |
| SRR6365693 | panicle | Wild type | 133.72 | HC |
| SRR6365694 | panicle | Wild type | 120.51 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 72.52 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 294.87 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 224.22 | HC |
| SRR6810101 | seedling | seedling | 682.18 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 650.79 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 715.54 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 127.04 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 127.88 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 1296.65 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 1249.69 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 91.93 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 380.36 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 924.30 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 5595.94 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 4578.40 | HC |
| SRR6365691 | panicle | Wild type | 139.46 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 519.78 | HC |
| SRR10690153 | leaf | IRBB5_0h | 3426.39 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 313.33 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 686.84 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 499.30 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 4690.49 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1038.14 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 713.79 | HC |
| SRR3110556 | shoot | shoot control | 72.89 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 1364.93 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 82.86 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 2409.65 | HC |
| SRR1061616 | panicle | Normal | 162.58 | HC |
| SRR1061617 | panicle | Heat Stress | 261.18 | HC |
| SRR1061614 | panicle | Normal | 132.73 | HC |
| SRR1061615 | panicle | Heat Stress | 263.98 | HC |
| SRR1061612 | panicle | Normal | 139.79 | HC |
| SRR1061613 | panicle | Heat Stress | 254.44 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 430.63 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 55.68 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 135.84 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 710.28 | HC |
| SRR1061618 | flag_leaf | Normal | 332.65 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 179.36 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 562.86 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 914.88 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 55.52 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 940.52 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 729.44 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 791.02 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 1000.76 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 743.07 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 61.28 | HC |
| SRR3140954 | leaf | "45C, 12h" | 355.95 | HC |
| SRR089621 | panicle | cold | 202.69 | HC |
| SRR089620 | panicle | drought | 317.43 | HC |
| SRR3140957 | leaf | "45C, 24h" | 949.25 | HC |
| SRR089622 | panicle | salt | 156.12 | HC |
| SRR504360 | leaf | Nipponbare | 285.65 | HC |
| SRR504361 | leaf | Nov-93 | 314.59 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 704.64 | HC |
| SRR2544786 | embryo | dry seed | 348.19 | HC |
| SRR4098172 | seedling | Cold (4C) | 121.02 | HC |
| SRR3140956 | leaf | "45C, 24h" | 429.29 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 62.91 | HC |
| SRR3140953 | leaf | "45C, 0h" | 150.64 | HC |
| SRR6810102 | seedling | seedling | 956.29 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 934.16 | HC |
| SRR10956502 | panicle | WT | 177.92 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 172.19 | HC |
| SRR10956501 | panicle | WT | 188.04 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 1417.17 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 1074.54 | HC |
| SRR8258048 | leaf_sheath | R_bph | 1768.36 | HC |
| SRR1740023 | seedling | IR64-Control | 12.61 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 158.38 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 579.03 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 430.80 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 61.83 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 50.78 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 1333.59 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 146.94 | HC |
| SRR1654490 | leaf | wild type | 595.63 | HC |
| SRR3110557 | shoot | shoot treated | 171.98 | HC |
| SRR5940086 | panicle | Wild type | 259.42 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 1360.61 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 704.82 | HC |
| SRR8258051 | leaf_sheath | R_bph | 2132.63 | HC |
| SRR504362 | leaf | NPB X 93-11 | 271.24 | HC |