| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 692.58 | HC |
| SRR3140955 | leaf | "45C, 12h" | 45.52 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 771.70 | HC |
| SRR8258050 | leaf_sheath | R_bph | 969.46 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 246.69 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 1014.21 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 562.12 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 662.46 | HC |
| SRR10690152 | leaf | IRBB5_0h | 5928.77 | HC |
| SRR6810106 | panicle | panicle | 67.88 | HC |
| SRR7058097 | leaf | rice_mock | 787.61 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 22.56 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 392.93 | HC |
| SRR7058098 | leaf | rice_RSV | 938.21 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 5531.04 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 36.14 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 13.62 | HC |
| SRR2154074 | seed | Nipponbare_seed | 13.97 | HC |
| SRR10690151 | leaf | IRBB5_0h | 4937.52 | HC |
| SRR2154072 | seed | Rathuwee_seed | 12.73 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 10.77 | HC |
| SRR2154070 | seed | Guangluai4_seed | 16.12 | HC |
| SRR2154071 | seed | KDM105_seed | 7.77 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 11.30 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5447.55 | HC |
| SRR1061625 | panicle | Heat Stress | 45.44 | HC |
| SRR1061624 | panicle | Normal | 156.20 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 439.30 | HC |
| SRR1061622 | flag_leaf | Normal | 377.63 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 437.72 | HC |
| SRR1061620 | flag_leaf | Normal | 429.64 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5843.25 | HC |
| SRR10704058 | leaf | Glyphosate | 1024.24 | HC |
| SRR447128 | root | As(III) 20 uM | 72.85 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 6738.70 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 39.38 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 117.84 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 16.27 | HC |
| SRR1013787 | panicle | PA64s_PA | 41.95 | HC |
| SRR504363 | leaf | 93-11 X NPB | 162.75 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 105.29 | HC |
| SRR1013789 | panicle | 93-11_PA | 6.57 | HC |
| SRR1013788 | panicle | LYP9_PA | 14.58 | HC |
| SRR9070101 | shoot_base | WT_base | 8.37 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 44.26 | HC |
| SRR6810105 | panicle | panicle | 68.45 | HC |
| SRR089619 | panicle | control | 89.10 | HC |
| SRR447135 | shoot | As(III) 20 uM | 91.94 | HC |
| SRR447134 | shoot | As(III) 80 uM | 64.61 | HC |
| SRR447133 | shoot | As(III) 20 uM | 122.95 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 81.36 | HC |
| SRR447131 | root | As(III) 80 uM | 66.96 | HC |
| SRR447130 | root | As(III) 20 uM | 163.33 | HC |
| SRR1849765 | leaf | Control 30min | 259.98 | HC |
| SRR1849767 | leaf | Control 30min | 286.06 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 64.29 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 349.33 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 48.58 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 625.50 | HC |
| SRR6498701 | leaf | "WT, Control" | 433.18 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 724.42 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 1959.31 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 134.61 | HC |
| SRR3203907 | leaf | WT | 52.32 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 537.42 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 4598.95 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 3035.44 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 888.47 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 1502.69 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 322.59 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 861.85 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 2068.10 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1172.85 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1881.73 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 3461.31 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 504.91 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 119.90 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 131.55 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 138.36 | HC |
| SRR447129 | root | As(III) 80 uM | 46.00 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 80.85 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 285.39 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 280.04 | HC |
| SRR1849773 | leaf | Control 120min | 310.67 | HC |
| SRR1849772 | leaf | Control 120min | 301.66 | HC |
| SRR1849771 | leaf | Control 120min | 359.70 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 340.14 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 92.95 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 42.45 | HC |
| SRR3130370 | leaf | control 8 hour | 93.95 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 87.34 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 55.75 | HC |
| SRR7058096 | leaf | rice_mock | 744.10 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 39.75 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 70.25 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 22.75 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 105.72 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 121.45 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 237.74 | HC |
| SRR6365689 | seedling | Wild type | 49.05 | HC |
| SRR447136 | shoot | As(III) 80 uM | 55.95 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 97.60 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 321.01 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 207.28 | HC |
| SRR10704060 | leaf | Glyphosate | 890.93 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 335.15 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 19.82 | HC |
| SRR2154075 | seed | Taipei309_seed | 12.30 | HC |
| SRR3140952 | leaf | "45C, 0h" | 231.10 | HC |
| SRR976171 | lamina_joint | wild type | 103.16 | HC |
| SRR4098208 | root | No treatment | 41.30 | HC |
| SRR4098209 | leaf | No treatment | 63.93 | HC |
| SRR3130369 | leaf | control 8 hour | 74.28 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 84.03 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 99.07 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 119.87 | HC |
| SRR9070100 | shoot_base | WT_base | 11.24 | HC |
| SRR4098205 | seedling | Heat (50C) | 39.39 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 457.62 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 136.99 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 112.25 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 112.86 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 171.02 | HC |
| SRR3130365 | leaf | control 0 hour | 113.63 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 137.50 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 56.37 | HC |
| SRR3130366 | leaf | control 0 hour | 92.05 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 82.73 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 84.51 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 51.64 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 29.01 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 27.65 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 25.57 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 60.47 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 223.10 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 29.62 | HC |
| SRR2862363 | leaf | mock leaf cells | 210.11 | HC |
| SRR8649147 | panicle | panicle tissue | 32.95 | HC |
| SRR4098207 | panicle | No treatment | 18.77 | HC |
| SRR10704055 | leaf | CK | 258.76 | HC |
| SRR10704057 | leaf | CK | 783.33 | HC |
| SRR10704056 | leaf | CK | 299.98 | HC |
| SRR10704059 | leaf | Glyphosate | 166.77 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 323.94 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 102.96 | HC |
| SRR9070102 | shoot_base | WT_base | 8.37 | HC |
| SRR6498699 | leaf | "WT, Control" | 360.54 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 102.40 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 5436.64 | HC |
| SRR10690144 | leaf | IR24_0h | 6437.62 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 5303.11 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 5516.31 | HC |
| SRR10690143 | leaf | IR24_0h | 7168.97 | HC |
| SRR10690142 | leaf | IR24_0h | 5866.52 | HC |
| SRR2646852 | panicle | FP | 103.33 | HC |
| SRR2646853 | panicle | FP | 125.60 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 75.84 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 117.04 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 5005.23 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 5366.39 | HC |
| SRR2646854 | panicle | SP | 120.52 | HC |
| SRR2646855 | panicle | SP | 94.75 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 111.57 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 40.94 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 39.03 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 16.02 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 24.44 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 23.07 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 36.01 | HC |
| SRR6365690 | seedling | Wild type | 47.53 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 21.57 | HC |
| SRR6365692 | panicle | Wild type | 47.74 | HC |
| SRR6365693 | panicle | Wild type | 60.10 | HC |
| SRR6365694 | panicle | Wild type | 61.65 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 46.08 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 91.50 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 70.63 | HC |
| SRR6810101 | seedling | seedling | 224.77 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 279.11 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 371.28 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 35.66 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 9.28 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 448.85 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 759.20 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 35.86 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 571.65 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1224.66 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 5545.64 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 6458.62 | HC |
| SRR1849784 | root | Control 120min | 132.32 | HC |
| SRR6365691 | panicle | Wild type | 54.91 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 1073.85 | HC |
| SRR10690153 | leaf | IRBB5_0h | 6555.06 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 647.16 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 1775.13 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 1369.80 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 6816.02 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1770.90 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 803.71 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 994.27 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 95.09 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 968.84 | HC |
| SRR1061616 | panicle | Normal | 141.12 | HC |
| SRR1061617 | panicle | Heat Stress | 119.66 | HC |
| SRR1061614 | panicle | Normal | 146.05 | HC |
| SRR1061615 | panicle | Heat Stress | 118.32 | HC |
| SRR1061612 | panicle | Normal | 63.84 | HC |
| SRR1061613 | panicle | Heat Stress | 84.55 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 107.82 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 111.71 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 67.80 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 404.60 | HC |
| SRR1061618 | flag_leaf | Normal | 229.44 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 233.77 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 219.37 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 386.61 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 84.92 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 356.38 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 221.53 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 227.48 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 472.71 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 961.24 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 99.46 | HC |
| SRR3140954 | leaf | "45C, 12h" | 204.80 | HC |
| SRR089621 | panicle | cold | 107.17 | HC |
| SRR089620 | panicle | drought | 121.64 | HC |
| SRR3140957 | leaf | "45C, 24h" | 509.53 | HC |
| SRR089622 | panicle | salt | 78.42 | HC |
| SRR504360 | leaf | Nipponbare | 89.00 | HC |
| SRR504361 | leaf | Nov-93 | 98.51 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 1295.96 | HC |
| SRR2544786 | embryo | dry seed | 640.91 | HC |
| SRR4098172 | seedling | Cold (4C) | 67.92 | HC |
| SRR3140956 | leaf | "45C, 24h" | 305.02 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 111.02 | HC |
| SRR3140953 | leaf | "45C, 0h" | 245.21 | HC |
| SRR6810102 | seedling | seedling | 271.01 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 364.72 | HC |
| SRR10956502 | panicle | WT | 56.44 | HC |
| SRR10956501 | panicle | WT | 56.42 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 639.86 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 1911.52 | HC |
| SRR8258048 | leaf_sheath | R_bph | 985.29 | HC |
| SRR1740023 | seedling | IR64-Control | 42.33 | HC |
| SRR1740025 | seedling | PK-Control | 36.49 | HC |
| SRR1740024 | seedling | N22-Control | 40.17 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 292.39 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 225.38 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 129.77 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 101.47 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 703.87 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 59.57 | HC |
| SRR1654490 | leaf | wild type | 49.38 | HC |
| SRR3110557 | shoot | shoot treated | 140.44 | HC |
| SRR5940086 | panicle | Wild type | 85.05 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 353.98 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 102.52 | HC |
| SRR8258051 | leaf_sheath | R_bph | 856.94 | HC |
| SRR504362 | leaf | NPB X 93-11 | 49.95 | HC |