| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 0.89 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 0.65 | MC |
| SRR8258050 | leaf_sheath | R_bph | 1.64 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 0.99 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 1.41 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 0.78 | MC |
| SRR10690152 | leaf | IRBB5_0h | 6.05 | MC |
| SRR7058097 | leaf | rice_mock | 1.33 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.78 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.99 | MC |
| SRR7058098 | leaf | rice_RSV | 1.80 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1.32 | MC |
| SRR2154074 | seed | Nipponbare_seed | 0.82 | MC |
| SRR10690151 | leaf | IRBB5_0h | 5.03 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 1.26 | MC |
| SRR2154070 | seed | Guangluai4_seed | 0.24 | MC |
| SRR2154071 | seed | KDM105_seed | 0.31 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.31 | MC |
| SRR1061622 | flag_leaf | Normal | 0.70 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 0.71 | MC |
| SRR1061620 | flag_leaf | Normal | 0.71 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.59 | MC |
| SRR447128 | root | As(III) 20 uM | 0.34 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2.01 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 0.75 | MC |
| SRR1013787 | panicle | PA64s_PA | 0.71 | MC |
| SRR504363 | leaf | 93-11 X NPB | 3.81 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 1.01 | MC |
| SRR9070101 | shoot_base | WT_base | 0.34 | MC |
| SRR089619 | panicle | control | 3.92 | MC |
| SRR447130 | root | As(III) 20 uM | 0.35 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 0.64 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 0.86 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 6.00 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 3.51 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 4.68 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1.03 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 3.30 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 0.24 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 2.10 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.30 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 0.80 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 2.29 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 1.29 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 3.51 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.55 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.42 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 1.89 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 1.06 | MC |
| SRR7058096 | leaf | rice_mock | 0.63 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.08 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.19 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.52 | MC |
| SRR2154075 | seed | Taipei309_seed | 0.82 | MC |
| SRR976171 | lamina_joint | wild type | 2.70 | MC |
| SRR4098208 | root | No treatment | 1.53 | MC |
| SRR089774 | panicle | wild-type | 1.48 | MC |
| SRR089772 | panicle | wild-type | 0.81 | MC |
| SRR4098209 | leaf | No treatment | 1.21 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.40 | MC |
| SRR9070100 | shoot_base | WT_base | 0.34 | MC |
| SRR4098205 | seedling | Heat (50C) | 0.48 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.02 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.63 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.65 | MC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 0.30 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 0.12 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1.33 | MC |
| SRR4098207 | panicle | No treatment | 2.15 | MC |
| SRR10704055 | leaf | CK | 0.96 | MC |
| SRR10704057 | leaf | CK | 0.93 | MC |
| SRR10704056 | leaf | CK | 0.56 | MC |
| SRR10704059 | leaf | Glyphosate | 0.45 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 0.43 | MC |
| SRR9070102 | shoot_base | WT_base | 0.20 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.50 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.46 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.21 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.48 | MC |
| SRR10690143 | leaf | IR24_0h | 4.59 | MC |
| SRR2646852 | panicle | FP | 0.21 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.62 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.53 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.91 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.32 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 0.58 | MC |
| SRR4098203 | seedling | No treatment | 0.98 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 1.04 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 1.33 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 1.10 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 0.63 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.21 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.97 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2.32 | MC |
| SRR1849784 | root | Control 120min | 0.52 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 2.02 | MC |
| SRR10690153 | leaf | IRBB5_0h | 2.93 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 1.56 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 2.69 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 2.00 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.37 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1.60 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1.22 | MC |
| SRR3110556 | shoot | shoot control | 3.15 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 3.03 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 3.53 | MC |
| SRR1061616 | panicle | Normal | 0.32 | MC |
| SRR1061617 | panicle | Heat Stress | 0.25 | MC |
| SRR1061615 | panicle | Heat Stress | 0.35 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.60 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2.79 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 1.17 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 0.56 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 1.92 | MC |
| SRR089621 | panicle | cold | 6.22 | MC |
| SRR089620 | panicle | drought | 6.72 | MC |
| SRR089622 | panicle | salt | 4.29 | MC |
| SRR504360 | leaf | Nipponbare | 10.52 | MC |
| SRR504361 | leaf | Nov-93 | 0.66 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 2.52 | MC |
| SRR2544786 | embryo | dry seed | 1.52 | MC |
| SRR4098172 | seedling | Cold (4C) | 1.20 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 0.71 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 1.70 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 2.47 | MC |
| SRR8258048 | leaf_sheath | R_bph | 1.52 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.29 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 0.85 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 0.20 | MC |
| SRR1654490 | leaf | wild type | 0.47 | MC |
| SRR3110557 | shoot | shoot treated | 4.07 | MC |
| SRR5940086 | panicle | Wild type | 0.26 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.24 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.52 | MC |
| SRR8258051 | leaf_sheath | R_bph | 1.30 | MC |
| SRR504362 | leaf | NPB X 93-11 | 1.45 | MC |