| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 27.02 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 29.66 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 0.30 | MC |
| SRR8258050 | leaf_sheath | R_bph | 35.71 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 34.52 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 16.11 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 10.43 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.89 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 2.23 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 1.23 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 0.89 | MC |
| SRR2154077 | seedling | KDM105_seedling | 1.60 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.45 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1.53 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 2.70 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 15.16 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 7.83 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 4.23 | MC |
| SRR9070101 | shoot_base | WT_base | 0.70 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 5.63 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 10.19 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 45.26 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 4.50 | MC |
| SRR6498701 | leaf | "WT, Control" | 4.26 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 1.11 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 3.87 | MC |
| SRR3203907 | leaf | WT | 9.23 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 2.94 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 2.34 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 5.68 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 5.89 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 4.37 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 4.68 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 2.71 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 9.15 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 46.84 | MC |
| SRR1849772 | leaf | Control 120min | 33.59 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 2.72 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 16.24 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 2.05 | MC |
| SRR976171 | lamina_joint | wild type | 10.04 | MC |
| SRR4098208 | root | No treatment | 0.27 | MC |
| SRR4098209 | leaf | No treatment | 0.33 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 2.84 | MC |
| SRR9070100 | shoot_base | WT_base | 0.48 | MC |
| SRR4098205 | seedling | Heat (50C) | 1.10 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 6.65 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2.89 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 5.58 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 14.67 | MC |
| SRR2862364 | leaf | mock leaf cells | 4.44 | MC |
| SRR2862365 | leaf | mock leaf cells | 1.14 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1.45 | MC |
| SRR8649147 | panicle | panicle tissue | 0.40 | MC |
| SRR4098207 | panicle | No treatment | 5.66 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.91 | MC |
| SRR9070102 | shoot_base | WT_base | 0.57 | MC |
| SRR6498699 | leaf | "WT, Control" | 0.86 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 2.82 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.41 | MC |
| SRR2646852 | panicle | FP | 1.18 | MC |
| SRR2646853 | panicle | FP | 1.77 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.74 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.60 | MC |
| SRR2646854 | panicle | SP | 7.13 | MC |
| SRR2646855 | panicle | SP | 10.99 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 4.46 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 1.44 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 3.08 | MC |
| SRR4098203 | seedling | No treatment | 5.25 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 0.82 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 1.10 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 0.91 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 0.75 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 5.49 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 1.69 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 13.61 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 9.00 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 1.42 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 2.74 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 12.42 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 15.65 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 0.38 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 2.16 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 3.86 | MC |
| SRR1849784 | root | Control 120min | 0.52 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.89 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 4.66 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 3.31 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 6.20 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 2.65 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 8.33 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 12.29 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 5.95 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 11.80 | MC |
| SRR3140957 | leaf | "45C, 24h" | 0.89 | MC |
| SRR504360 | leaf | Nipponbare | 1.02 | MC |
| SRR504361 | leaf | Nov-93 | 0.66 | MC |
| SRR3140956 | leaf | "45C, 24h" | 0.68 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 12.40 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 17.40 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 1.28 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 13.50 | MC |
| SRR8258048 | leaf_sheath | R_bph | 36.87 | MC |
| SRR1740023 | seedling | IR64-Control | 1.22 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 1.77 | MC |
| SRR1740025 | seedling | PK-Control | 1.44 | MC |
| SRR1740024 | seedling | N22-Control | 1.50 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.72 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 20.37 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 2.51 | MC |
| SRR1654490 | leaf | wild type | 9.15 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1.56 | MC |
| SRR8258051 | leaf_sheath | R_bph | 25.14 | MC |