| SRR5120079 | leaf_sheath | PC_0 | 158.94 | HC |
| SRR10690152 | leaf | IRBB5_0h | 52.76 | HC |
| SRR6810106 | panicle | panicle | 68.74 | HC |
| SRR7058097 | leaf | rice_mock | 145.39 | HC |
| SRR7058098 | leaf | rice_RSV | 298.84 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 161.68 | HC |
| SRR10690151 | leaf | IRBB5_0h | 51.22 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 149.51 | HC |
| SRR1061625 | panicle | Heat Stress | 55.39 | HC |
| SRR1061624 | panicle | Normal | 150.42 | HC |
| SRR1061622 | flag_leaf | Normal | 146.27 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 247.91 | HC |
| SRR1061620 | flag_leaf | Normal | 60.36 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 185.04 | HC |
| SRR10704058 | leaf | Glyphosate | 80.43 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 199.06 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 19.88 | HC |
| SRR1013787 | panicle | PA64s_PA | 49.13 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 23.39 | HC |
| SRR1013789 | panicle | 93-11_PA | 8.40 | HC |
| SRR1013788 | panicle | LYP9_PA | 33.98 | HC |
| SRR6810105 | panicle | panicle | 59.05 | HC |
| SRR089619 | panicle | control | 13.02 | HC |
| SRR1849765 | leaf | Control 30min | 52.72 | HC |
| SRR1849767 | leaf | Control 30min | 42.62 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 153.01 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 13.56 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 19.86 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 4.68 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 10.18 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 21.92 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 11.51 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 26.17 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 27.60 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 48.41 | HC |
| SRR1849773 | leaf | Control 120min | 45.56 | HC |
| SRR1849771 | leaf | Control 120min | 39.53 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 58.54 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 70.24 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 19.42 | HC |
| SRR3130370 | leaf | control 8 hour | 43.15 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 46.61 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 24.95 | HC |
| SRR7058096 | leaf | rice_mock | 227.80 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 17.17 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 34.94 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 5.87 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 90.71 | HC |
| SRR6365689 | seedling | Wild type | 390.71 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 13.69 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 137.17 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 6.76 | HC |
| SRR10704060 | leaf | Glyphosate | 120.68 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 194.50 | HC |
| SRR3130369 | leaf | control 8 hour | 20.40 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 36.76 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 17.66 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 326.15 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 31.95 | HC |
| SRR3130365 | leaf | control 0 hour | 24.49 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 40.03 | HC |
| SRR3130366 | leaf | control 0 hour | 50.35 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 12.99 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 14.55 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 16.90 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 10.97 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 18.49 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 17.52 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 29.72 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 92.15 | HC |
| SRR2862363 | leaf | mock leaf cells | 168.23 | HC |
| SRR10704055 | leaf | CK | 36.63 | HC |
| SRR10704057 | leaf | CK | 82.33 | HC |
| SRR10704056 | leaf | CK | 40.25 | HC |
| SRR10704059 | leaf | Glyphosate | 11.51 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 95.42 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 325.00 | HC |
| SRR10690144 | leaf | IR24_0h | 121.64 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 323.56 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 238.08 | HC |
| SRR10690143 | leaf | IR24_0h | 107.76 | HC |
| SRR10690142 | leaf | IR24_0h | 125.22 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 204.07 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 324.76 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 9.92 | HC |
| SRR6365690 | seedling | Wild type | 371.81 | HC |
| SRR6365692 | panicle | Wild type | 126.45 | HC |
| SRR6365693 | panicle | Wild type | 101.36 | HC |
| SRR6365694 | panicle | Wild type | 104.15 | HC |
| SRR6810101 | seedling | seedling | 346.05 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 186.89 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 180.14 | HC |
| SRR6365691 | panicle | Wild type | 123.77 | HC |
| SRR10690153 | leaf | IRBB5_0h | 105.96 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 217.27 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 14.25 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 9.65 | HC |
| SRR3110556 | shoot | shoot control | 60.30 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 11.87 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 30.36 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 30.15 | HC |
| SRR1061616 | panicle | Normal | 137.73 | HC |
| SRR1061617 | panicle | Heat Stress | 197.18 | HC |
| SRR1061614 | panicle | Normal | 120.19 | HC |
| SRR1061615 | panicle | Heat Stress | 263.25 | HC |
| SRR1061612 | panicle | Normal | 106.24 | HC |
| SRR1061613 | panicle | Heat Stress | 103.55 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 11.75 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 282.45 | HC |
| SRR1061618 | flag_leaf | Normal | 78.87 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 57.14 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 115.28 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 127.50 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 13.91 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 19.09 | HC |
| SRR089621 | panicle | cold | 17.06 | HC |
| SRR089620 | panicle | drought | 17.17 | HC |
| SRR089622 | panicle | salt | 10.54 | HC |
| SRR6810102 | seedling | seedling | 431.87 | HC |
| SRR10956502 | panicle | WT | 11.17 | HC |
| SRR10956501 | panicle | WT | 12.37 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 11.55 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 46.48 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 64.41 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 18.16 | HC |
| SRR3110557 | shoot | shoot treated | 50.69 | HC |
| SRR5940086 | panicle | Wild type | 44.68 | HC |