| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 24.82 | MC |
| SRR3140955 | leaf | "45C, 12h" | 1.40 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 12.77 | MC |
| SRR8258050 | leaf_sheath | R_bph | 14.38 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 19.73 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 4.65 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 1.82 | MC |
| SRR10690152 | leaf | IRBB5_0h | 2.35 | MC |
| SRR6810106 | panicle | panicle | 1.08 | MC |
| SRR7058097 | leaf | rice_mock | 0.58 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 3.48 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 10.38 | MC |
| SRR2154077 | seedling | KDM105_seedling | 11.61 | MC |
| SRR10690151 | leaf | IRBB5_0h | 2.77 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 3.50 | MC |
| SRR1061625 | panicle | Heat Stress | 1.54 | MC |
| SRR1061624 | panicle | Normal | 4.17 | MC |
| SRR1061622 | flag_leaf | Normal | 0.85 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 0.28 | MC |
| SRR1061620 | flag_leaf | Normal | 0.82 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.88 | MC |
| SRR10704058 | leaf | Glyphosate | 3.09 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.24 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 5.13 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 0.99 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 0.70 | MC |
| SRR504363 | leaf | 93-11 X NPB | 4.53 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.42 | MC |
| SRR1013789 | panicle | 93-11_PA | 4.19 | MC |
| SRR1013788 | panicle | LYP9_PA | 6.21 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 3.42 | MC |
| SRR6810105 | panicle | panicle | 1.13 | MC |
| SRR447135 | shoot | As(III) 20 uM | 1.44 | MC |
| SRR447134 | shoot | As(III) 80 uM | 1.00 | MC |
| SRR447133 | shoot | As(III) 20 uM | 1.16 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 0.92 | MC |
| SRR447130 | root | As(III) 20 uM | 0.52 | MC |
| SRR1849765 | leaf | Control 30min | 1.35 | MC |
| SRR1849767 | leaf | Control 30min | 4.97 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 2.41 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 1.90 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 12.68 | MC |
| SRR6498701 | leaf | "WT, Control" | 10.85 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 19.48 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 1.66 | MC |
| SRR3203907 | leaf | WT | 0.76 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 7.07 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 2.16 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 1.62 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1.36 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 2.79 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 0.81 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 3.06 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 5.56 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 5.55 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1.27 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 2.47 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 0.76 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 3.15 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 3.18 | MC |
| SRR1849773 | leaf | Control 120min | 3.30 | MC |
| SRR1849772 | leaf | Control 120min | 3.66 | MC |
| SRR1849771 | leaf | Control 120min | 1.96 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 5.80 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 17.42 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 11.40 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.16 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.57 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 13.94 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 7.47 | MC |
| SRR6365689 | seedling | Wild type | 1.67 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 3.02 | MC |
| SRR10704060 | leaf | Glyphosate | 1.16 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 0.26 | MC |
| SRR3140952 | leaf | "45C, 0h" | 1.54 | MC |
| SRR4098208 | root | No treatment | 9.87 | MC |
| SRR089772 | panicle | wild-type | 0.81 | MC |
| SRR3130369 | leaf | control 8 hour | 13.49 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 11.39 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4.04 | MC |
| SRR9070100 | shoot_base | WT_base | 0.35 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 1.32 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 4.77 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 5.74 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 5.91 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 13.19 | MC |
| SRR3130366 | leaf | control 0 hour | 14.55 | MC |
| SRR2862364 | leaf | mock leaf cells | 1.97 | MC |
| SRR2862365 | leaf | mock leaf cells | 1.31 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 20.21 | MC |
| SRR2862363 | leaf | mock leaf cells | 33.24 | MC |
| SRR8649147 | panicle | panicle tissue | 0.32 | MC |
| SRR10704055 | leaf | CK | 2.34 | MC |
| SRR10704057 | leaf | CK | 3.24 | MC |
| SRR10704056 | leaf | CK | 2.45 | MC |
| SRR10704059 | leaf | Glyphosate | 1.25 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 3.69 | MC |
| SRR9070102 | shoot_base | WT_base | 0.16 | MC |
| SRR6498699 | leaf | "WT, Control" | 12.08 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.85 | MC |
| SRR10690144 | leaf | IR24_0h | 3.05 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.79 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.57 | MC |
| SRR10690143 | leaf | IR24_0h | 2.44 | MC |
| SRR10690142 | leaf | IR24_0h | 2.63 | MC |
| SRR2646853 | panicle | FP | 0.89 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.24 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1.83 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.72 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 2.34 | MC |
| SRR6365690 | seedling | Wild type | 0.35 | MC |
| SRR6365692 | panicle | Wild type | 9.39 | MC |
| SRR6365693 | panicle | Wild type | 4.81 | MC |
| SRR6365694 | panicle | Wild type | 3.59 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 3.97 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 2.35 | MC |
| SRR6810101 | seedling | seedling | 2.61 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 2.67 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 2.53 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 14.61 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 5.42 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.15 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.20 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2.93 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2.24 | MC |
| SRR1849784 | root | Control 120min | 0.52 | MC |
| SRR6365691 | panicle | Wild type | 8.73 | MC |
| SRR10690153 | leaf | IRBB5_0h | 3.09 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.28 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 2.82 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.06 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 0.94 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 0.94 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 1.52 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 5.36 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 5.70 | MC |
| SRR1061616 | panicle | Normal | 1.82 | MC |
| SRR1061617 | panicle | Heat Stress | 2.55 | MC |
| SRR1061614 | panicle | Normal | 1.06 | MC |
| SRR1061615 | panicle | Heat Stress | 1.79 | MC |
| SRR1061613 | panicle | Heat Stress | 3.70 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 0.36 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 0.96 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 0.27 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 14.94 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 12.05 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 1.56 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 1.76 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 0.90 | MC |
| SRR3140954 | leaf | "45C, 12h" | 3.71 | MC |
| SRR3140957 | leaf | "45C, 24h" | 9.35 | MC |
| SRR504360 | leaf | Nipponbare | 13.31 | MC |
| SRR504361 | leaf | Nov-93 | 8.90 | MC |
| SRR3140956 | leaf | "45C, 24h" | 16.55 | MC |
| SRR3140953 | leaf | "45C, 0h" | 1.74 | MC |
| SRR6810102 | seedling | seedling | 2.18 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 1.55 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 16.90 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 3.44 | MC |
| SRR8258048 | leaf_sheath | R_bph | 15.96 | MC |
| SRR1740023 | seedling | IR64-Control | 4.07 | MC |
| SRR1740025 | seedling | PK-Control | 2.51 | MC |
| SRR1740024 | seedling | N22-Control | 1.28 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 16.72 | MC |
| SRR1654490 | leaf | wild type | 3.83 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.52 | MC |
| SRR8258051 | leaf_sheath | R_bph | 16.31 | MC |
| SRR504362 | leaf | NPB X 93-11 | 12.28 | MC |