| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 1.04 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 0.98 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 0.44 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 0.99 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 4.09 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 3.52 | MC |
| SRR6810106 | panicle | panicle | 1.72 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1.92 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 3.72 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 3.32 | MC |
| SRR447128 | root | As(III) 20 uM | 0.52 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2.75 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 1.21 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 0.44 | MC |
| SRR6810105 | panicle | panicle | 0.56 | MC |
| SRR447131 | root | As(III) 80 uM | 0.68 | MC |
| SRR447130 | root | As(III) 20 uM | 1.04 | MC |
| SRR3203907 | leaf | WT | 0.31 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 0.24 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 0.54 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.35 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 0.35 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 8.69 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.23 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.56 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.68 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 0.49 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 0.45 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 0.36 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.19 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2.12 | MC |
| SRR3140952 | leaf | "45C, 0h" | 0.38 | MC |
| SRR4098208 | root | No treatment | 0.45 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.68 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 2.20 | MC |
| SRR4098205 | seedling | Heat (50C) | 2.19 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.42 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.65 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.08 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.66 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 4.13 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.42 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.62 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 4.32 | MC |
| SRR2646855 | panicle | SP | 8.29 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 0.88 | MC |
| SRR4098203 | seedling | No treatment | 7.24 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 0.42 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 0.26 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 1.82 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.31 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 0.91 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 2.66 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 3.34 | MC |
| SRR1849784 | root | Control 120min | 1.57 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 2.32 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 3.34 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 0.78 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 0.37 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 0.19 | MC |
| SRR3110556 | shoot | shoot control | 0.56 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 1.27 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.72 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 2.13 | MC |
| SRR1061614 | panicle | Normal | 0.21 | MC |
| SRR1061612 | panicle | Normal | 0.34 | MC |
| SRR1061613 | panicle | Heat Stress | 0.58 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 1.85 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.62 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 1.93 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.65 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 0.52 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.41 | MC |
| SRR4098172 | seedling | Cold (4C) | 3.23 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.80 | MC |
| SRR3140953 | leaf | "45C, 0h" | 0.38 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 0.99 | MC |
| SRR10956502 | panicle | WT | 0.72 | MC |
| SRR10956501 | panicle | WT | 1.26 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 3.50 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 1.31 | MC |
| SRR1740023 | seedling | IR64-Control | 2.04 | MC |
| SRR1740025 | seedling | PK-Control | 2.02 | MC |
| SRR1740024 | seedling | N22-Control | 1.28 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.34 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 5.13 | MC |
| SRR5940086 | panicle | Wild type | 0.52 | MC |