| SRR6810106 | panicle | panicle | 6.91 | HC |
| SRR1061622 | flag_leaf | Normal | 11.16 | HC |
| SRR1061620 | flag_leaf | Normal | 12.03 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 23.00 | HC |
| SRR9070101 | shoot_base | WT_base | 5.10 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 13.70 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 48.42 | HC |
| SRR6498701 | leaf | "WT, Control" | 43.39 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 54.41 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 47.57 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 20.67 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 21.29 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 21.52 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 3.45 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 10.59 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 8.19 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 17.76 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 18.44 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 19.70 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 19.67 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 8.34 | HC |
| SRR8649147 | panicle | panicle tissue | 17.55 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 15.16 | HC |
| SRR6498699 | leaf | "WT, Control" | 40.94 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 17.46 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 17.37 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 25.58 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 7.60 | HC |
| SRR1061616 | panicle | Normal | 3.56 | HC |
| SRR1061615 | panicle | Heat Stress | 4.59 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 22.42 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 17.44 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 28.97 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 17.30 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 39.59 | HC |
| SRR2544786 | embryo | dry seed | 27.45 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 20.83 | HC |
| SRR10956502 | panicle | WT | 16.82 | HC |
| SRR10956501 | panicle | WT | 20.51 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 23.14 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 20.45 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 3.61 | HC |