| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 27.05 | MC |
| SRR3140955 | leaf | "45C, 12h" | 0.80 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 19.32 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 1.95 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 12.60 | MC |
| SRR7058097 | leaf | rice_mock | 2.67 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 2.17 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.20 | MC |
| SRR7058098 | leaf | rice_RSV | 2.75 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.36 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 1.37 | MC |
| SRR2154077 | seedling | KDM105_seedling | 1.84 | MC |
| SRR2154074 | seed | Nipponbare_seed | 3.61 | MC |
| SRR2154072 | seed | Rathuwee_seed | 1.62 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 2.07 | MC |
| SRR2154070 | seed | Guangluai4_seed | 1.79 | MC |
| SRR2154071 | seed | KDM105_seed | 0.77 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 4.21 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.38 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1.12 | MC |
| SRR1061622 | flag_leaf | Normal | 0.86 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 0.28 | MC |
| SRR1061620 | flag_leaf | Normal | 0.24 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.31 | MC |
| SRR447128 | root | As(III) 20 uM | 0.34 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.56 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 0.65 | MC |
| SRR504363 | leaf | 93-11 X NPB | 1.19 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 9.30 | MC |
| SRR1013788 | panicle | LYP9_PA | 0.36 | MC |
| SRR9070101 | shoot_base | WT_base | 2.00 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 0.66 | MC |
| SRR447135 | shoot | As(III) 20 uM | 0.72 | MC |
| SRR447134 | shoot | As(III) 80 uM | 2.39 | MC |
| SRR447133 | shoot | As(III) 20 uM | 0.46 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 0.69 | MC |
| SRR447131 | root | As(III) 80 uM | 0.34 | MC |
| SRR447130 | root | As(III) 20 uM | 0.86 | MC |
| SRR1849765 | leaf | Control 30min | 1.35 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 1.80 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 0.51 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1.55 | MC |
| SRR6498701 | leaf | "WT, Control" | 1.16 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 1.21 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 12.71 | MC |
| SRR3203907 | leaf | WT | 0.99 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 0.29 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 0.25 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 0.23 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.29 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.30 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 8.68 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.69 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.56 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.20 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 1.26 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 2.13 | MC |
| SRR1849773 | leaf | Control 120min | 3.30 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 2.12 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 1.27 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 0.29 | MC |
| SRR3130370 | leaf | control 8 hour | 1.20 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 1.77 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 0.51 | MC |
| SRR7058096 | leaf | rice_mock | 3.26 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.16 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 1.58 | MC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 1.67 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.78 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 1.51 | MC |
| SRR447136 | shoot | As(III) 80 uM | 0.52 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.67 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 1.28 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 0.87 | MC |
| SRR2154075 | seed | Taipei309_seed | 2.02 | MC |
| SRR976171 | lamina_joint | wild type | 19.27 | MC |
| SRR4098208 | root | No treatment | 5.57 | MC |
| SRR3130369 | leaf | control 8 hour | 1.40 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 1.30 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.35 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.62 | MC |
| SRR9070100 | shoot_base | WT_base | 1.56 | MC |
| SRR4098205 | seedling | Heat (50C) | 1.93 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.14 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.27 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.90 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.99 | MC |
| SRR3130365 | leaf | control 0 hour | 1.44 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 0.67 | MC |
| SRR3130366 | leaf | control 0 hour | 0.94 | MC |
| SRR2862364 | leaf | mock leaf cells | 0.80 | MC |
| SRR2862365 | leaf | mock leaf cells | 0.81 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 7.28 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 1.44 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 7.36 | MC |
| SRR2862363 | leaf | mock leaf cells | 9.00 | MC |
| SRR8649147 | panicle | panicle tissue | 0.79 | MC |
| SRR4098207 | panicle | No treatment | 2.23 | MC |
| SRR10704055 | leaf | CK | 0.48 | MC |
| SRR10704057 | leaf | CK | 0.37 | MC |
| SRR10704056 | leaf | CK | 0.55 | MC |
| SRR10704059 | leaf | Glyphosate | 2.14 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 0.26 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.59 | MC |
| SRR9070102 | shoot_base | WT_base | 1.12 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 1.04 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 2.51 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 2.22 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.23 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.33 | MC |
| SRR4098203 | seedling | No treatment | 8.09 | MC |
| SRR6365692 | panicle | Wild type | 0.82 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 0.50 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.15 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.34 | MC |
| SRR1849784 | root | Control 120min | 0.52 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.21 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.24 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.39 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 0.20 | MC |
| SRR3110556 | shoot | shoot control | 21.21 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 2.98 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.62 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 7.13 | MC |
| SRR1061616 | panicle | Normal | 0.16 | MC |
| SRR1061613 | panicle | Heat Stress | 0.21 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.48 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 4.74 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 0.21 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 5.12 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 4.70 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.94 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 11.77 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 12.76 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 13.04 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.39 | MC |
| SRR3140954 | leaf | "45C, 12h" | 0.93 | MC |
| SRR089621 | panicle | cold | 5.61 | MC |
| SRR089620 | panicle | drought | 6.25 | MC |
| SRR3140957 | leaf | "45C, 24h" | 0.56 | MC |
| SRR089622 | panicle | salt | 6.44 | MC |
| SRR504360 | leaf | Nipponbare | 1.29 | MC |
| SRR504361 | leaf | Nov-93 | 0.66 | MC |
| SRR4098172 | seedling | Cold (4C) | 1.56 | MC |
| SRR3140956 | leaf | "45C, 24h" | 0.69 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.44 | MC |
| SRR3140953 | leaf | "45C, 0h" | 0.98 | MC |
| SRR6810102 | seedling | seedling | 1.25 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 27.14 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 0.84 | MC |
| SRR1740023 | seedling | IR64-Control | 0.96 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 1.77 | MC |
| SRR1740025 | seedling | PK-Control | 0.77 | MC |
| SRR1740024 | seedling | N22-Control | 0.64 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 1.17 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 1.92 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.07 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.78 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 0.50 | MC |
| SRR1654490 | leaf | wild type | 0.82 | MC |
| SRR3110557 | shoot | shoot treated | 24.59 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 3.27 | MC |
| SRR504362 | leaf | NPB X 93-11 | 3.20 | MC |