| SRR3140955 | leaf | "45C, 12h" | 0.60 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 1.04 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 5.97 | MC |
| SRR7058097 | leaf | rice_mock | 3.00 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 1.16 | MC |
| SRR7058098 | leaf | rice_RSV | 9.12 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 23.64 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 1.51 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 6.74 | MC |
| SRR2154077 | seedling | KDM105_seedling | 6.76 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 1.02 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 18.35 | MC |
| SRR1061625 | panicle | Heat Stress | 0.24 | MC |
| SRR1061624 | panicle | Normal | 0.24 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1.94 | MC |
| SRR1061622 | flag_leaf | Normal | 0.84 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 1.15 | MC |
| SRR1061620 | flag_leaf | Normal | 1.41 | MC |
| SRR10704058 | leaf | Glyphosate | 8.98 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 13.93 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.78 | MC |
| SRR1013787 | panicle | PA64s_PA | 0.82 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.26 | MC |
| SRR1013788 | panicle | LYP9_PA | 0.47 | MC |
| SRR9070101 | shoot_base | WT_base | 0.26 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 0.77 | MC |
| SRR089619 | panicle | control | 0.67 | MC |
| SRR447135 | shoot | As(III) 20 uM | 2.00 | MC |
| SRR447134 | shoot | As(III) 80 uM | 2.59 | MC |
| SRR447133 | shoot | As(III) 20 uM | 13.02 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 0.69 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 0.76 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 4.15 | MC |
| SRR6498701 | leaf | "WT, Control" | 6.98 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 7.16 | MC |
| SRR3203907 | leaf | WT | 4.58 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1.77 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 0.51 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 0.37 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 2.67 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 4.71 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 3.81 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 4.26 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1.88 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 0.25 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 1.09 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 19.17 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.82 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.08 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 2.83 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 0.89 | MC |
| SRR3130370 | leaf | control 8 hour | 2.48 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 2.80 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 1.44 | MC |
| SRR7058096 | leaf | rice_mock | 2.98 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.08 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 7.39 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 4.30 | MC |
| SRR447136 | shoot | As(III) 80 uM | 1.32 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 3.72 | MC |
| SRR10704060 | leaf | Glyphosate | 2.78 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 8.67 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 2.17 | MC |
| SRR4098208 | root | No treatment | 0.72 | MC |
| SRR089772 | panicle | wild-type | 1.62 | MC |
| SRR4098209 | leaf | No treatment | 0.65 | MC |
| SRR3130369 | leaf | control 8 hour | 2.91 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 1.83 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.46 | MC |
| SRR9070100 | shoot_base | WT_base | 0.16 | MC |
| SRR4098205 | seedling | Heat (50C) | 3.30 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 1.00 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.77 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.36 | MC |
| SRR3130365 | leaf | control 0 hour | 3.78 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 2.20 | MC |
| SRR3130366 | leaf | control 0 hour | 6.24 | MC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 0.14 | MC |
| SRR2862364 | leaf | mock leaf cells | 14.94 | MC |
| SRR2862365 | leaf | mock leaf cells | 13.72 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 4.97 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 0.56 | MC |
| SRR2862363 | leaf | mock leaf cells | 10.04 | MC |
| SRR8649147 | panicle | panicle tissue | 0.24 | MC |
| SRR4098207 | panicle | No treatment | 0.19 | MC |
| SRR10704055 | leaf | CK | 3.05 | MC |
| SRR10704057 | leaf | CK | 8.53 | MC |
| SRR10704056 | leaf | CK | 4.67 | MC |
| SRR10704059 | leaf | Glyphosate | 3.83 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 0.70 | MC |
| SRR9070102 | shoot_base | WT_base | 0.19 | MC |
| SRR6498699 | leaf | "WT, Control" | 1.84 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 7.80 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 11.87 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.50 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 26.14 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 15.04 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 28.17 | MC |
| SRR2646852 | panicle | FP | 2.36 | MC |
| SRR2646853 | panicle | FP | 1.41 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 23.30 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 19.48 | MC |
| SRR2646854 | panicle | SP | 1.92 | MC |
| SRR2646855 | panicle | SP | 3.52 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 5.16 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 3.67 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 0.76 | MC |
| SRR4098203 | seedling | No treatment | 1.00 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 1.09 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 3.41 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 3.63 | MC |
| SRR6365690 | seedling | Wild type | 0.70 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 0.30 | MC |
| SRR6365694 | panicle | Wild type | 0.47 | MC |
| SRR6810101 | seedling | seedling | 2.33 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 4.80 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 0.61 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 1.77 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 1.00 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 2.23 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 1.92 | MC |
| SRR10690153 | leaf | IRBB5_0h | 11.28 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 3.84 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 4.99 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1.59 | MC |
| SRR3110556 | shoot | shoot control | 24.20 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 2.18 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 3.28 | MC |
| SRR1061616 | panicle | Normal | 0.16 | MC |
| SRR1061612 | panicle | Normal | 0.30 | MC |
| SRR1061613 | panicle | Heat Stress | 0.26 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.47 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 1.26 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 3.50 | MC |
| SRR1061618 | flag_leaf | Normal | 0.79 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 0.73 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 3.15 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 2.85 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.43 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 2.39 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.45 | MC |
| SRR089621 | panicle | cold | 1.40 | MC |
| SRR3140957 | leaf | "45C, 24h" | 0.97 | MC |
| SRR089622 | panicle | salt | 0.36 | MC |
| SRR4098172 | seedling | Cold (4C) | 1.32 | MC |
| SRR3140956 | leaf | "45C, 24h" | 2.43 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.48 | MC |
| SRR3140953 | leaf | "45C, 0h" | 0.39 | MC |
| SRR6810102 | seedling | seedling | 2.82 | MC |
| SRR10956502 | panicle | WT | 0.72 | MC |
| SRR10956501 | panicle | WT | 0.58 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 7.75 | MC |
| SRR1740025 | seedling | PK-Control | 0.48 | MC |
| SRR1740024 | seedling | N22-Control | 0.64 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 3.89 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 5.74 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.48 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2.02 | MC |
| SRR1654490 | leaf | wild type | 11.34 | MC |
| SRR3110557 | shoot | shoot treated | 5.54 | MC |
| SRR5940086 | panicle | Wild type | 1.30 | MC |