| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 124.32 | HC |
| SRR3140955 | leaf | "45C, 12h" | 102.93 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 106.05 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 78.69 | HC |
| SRR8258050 | leaf_sheath | R_bph | 205.83 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 2362.28 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 144.76 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 101.46 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 143.44 | HC |
| SRR10690152 | leaf | IRBB5_0h | 3127.06 | HC |
| SRR6810106 | panicle | panicle | 644.68 | HC |
| SRR7058097 | leaf | rice_mock | 420.94 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 108.72 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 317.56 | HC |
| SRR7058098 | leaf | rice_RSV | 432.45 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 2231.55 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 175.72 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 25.39 | HC |
| SRR2154077 | seedling | KDM105_seedling | 17.33 | HC |
| SRR2154074 | seed | Nipponbare_seed | 16.19 | HC |
| SRR10690151 | leaf | IRBB5_0h | 5309.46 | HC |
| SRR2154070 | seed | Guangluai4_seed | 9.49 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 58.35 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1109.39 | HC |
| SRR1061625 | panicle | Heat Stress | 1058.76 | HC |
| SRR1061624 | panicle | Normal | 703.07 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1253.97 | HC |
| SRR1061622 | flag_leaf | Normal | 1190.14 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 1613.70 | HC |
| SRR1061620 | flag_leaf | Normal | 4283.52 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1355.11 | HC |
| SRR10704058 | leaf | Glyphosate | 1799.22 | HC |
| SRR447128 | root | As(III) 20 uM | 53.07 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1853.91 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 156.77 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 75.99 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 23.49 | HC |
| SRR1013787 | panicle | PA64s_PA | 56.35 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 26.42 | HC |
| SRR504363 | leaf | 93-11 X NPB | 83.17 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 448.35 | HC |
| SRR1013789 | panicle | 93-11_PA | 17.02 | HC |
| SRR1013788 | panicle | LYP9_PA | 23.41 | HC |
| SRR9070101 | shoot_base | WT_base | 13.14 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 44.03 | HC |
| SRR6810105 | panicle | panicle | 548.54 | HC |
| SRR089619 | panicle | control | 121.42 | HC |
| SRR447135 | shoot | As(III) 20 uM | 97.38 | HC |
| SRR447134 | shoot | As(III) 80 uM | 102.69 | HC |
| SRR447133 | shoot | As(III) 20 uM | 111.57 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 63.15 | HC |
| SRR447131 | root | As(III) 80 uM | 80.81 | HC |
| SRR447130 | root | As(III) 20 uM | 72.43 | HC |
| SRR1849765 | leaf | Control 30min | 17753.37 | HC |
| SRR1849767 | leaf | Control 30min | 13153.16 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 3484.44 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 15815.76 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 403.85 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 9182.52 | HC |
| SRR6498701 | leaf | "WT, Control" | 6697.93 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 3671.49 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 911.91 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 359.46 | HC |
| SRR3203907 | leaf | WT | 93.02 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 7927.66 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 1245.28 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 882.80 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 164.28 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 337.60 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 81.39 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 221.94 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 773.46 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 311.31 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 244.46 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 703.92 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 433.83 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 66.31 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 51.95 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 80.66 | HC |
| SRR447129 | root | As(III) 80 uM | 44.08 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 3777.22 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 12299.78 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 19668.68 | HC |
| SRR1849773 | leaf | Control 120min | 18375.67 | HC |
| SRR1849772 | leaf | Control 120min | 8279.86 | HC |
| SRR1849771 | leaf | Control 120min | 10396.05 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 17984.15 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 240.02 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 162.36 | HC |
| SRR3130370 | leaf | control 8 hour | 145.65 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 179.04 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 230.66 | HC |
| SRR7058096 | leaf | rice_mock | 292.40 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 212.80 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 269.61 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 28.44 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 110.32 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 157.09 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 1929.12 | HC |
| SRR6365689 | seedling | Wild type | 920.78 | HC |
| SRR447136 | shoot | As(III) 80 uM | 80.76 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 53.26 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 1503.82 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 129.82 | HC |
| SRR10704060 | leaf | Glyphosate | 2435.89 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 2906.38 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 82.24 | HC |
| SRR3140952 | leaf | "45C, 0h" | 244.47 | HC |
| SRR976171 | lamina_joint | wild type | 2065.20 | HC |
| SRR4098208 | root | No treatment | 200.91 | HC |
| SRR4098209 | leaf | No treatment | 169.74 | HC |
| SRR3130369 | leaf | control 8 hour | 112.12 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 135.40 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 147.71 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 82.15 | HC |
| SRR9070100 | shoot_base | WT_base | 8.39 | HC |
| SRR4098205 | seedling | Heat (50C) | 59.24 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 3400.69 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 142.82 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 46.08 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 60.89 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 181.36 | HC |
| SRR3130365 | leaf | control 0 hour | 259.03 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 172.42 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 161.15 | HC |
| SRR3130366 | leaf | control 0 hour | 180.96 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 67.50 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 72.20 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 114.88 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 206.62 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 1447.56 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 1438.23 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 738.75 | HC |
| SRR2862364 | leaf | mock leaf cells | 73.75 | HC |
| SRR2862365 | leaf | mock leaf cells | 53.58 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 77.55 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 152.45 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 118.04 | HC |
| SRR2862363 | leaf | mock leaf cells | 73.75 | HC |
| SRR8649147 | panicle | panicle tissue | 304.12 | HC |
| SRR4098207 | panicle | No treatment | 183.16 | HC |
| SRR10704055 | leaf | CK | 1832.32 | HC |
| SRR10704057 | leaf | CK | 4210.13 | HC |
| SRR10704056 | leaf | CK | 1717.69 | HC |
| SRR10704059 | leaf | Glyphosate | 917.59 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 680.08 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 163.31 | HC |
| SRR9070102 | shoot_base | WT_base | 7.44 | HC |
| SRR6498699 | leaf | "WT, Control" | 5570.04 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 37.50 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 32.84 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 42.92 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1968.74 | HC |
| SRR10690144 | leaf | IR24_0h | 2662.80 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 2359.03 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1833.38 | HC |
| SRR10690143 | leaf | IR24_0h | 1965.42 | HC |
| SRR10690142 | leaf | IR24_0h | 2230.16 | HC |
| SRR2646852 | panicle | FP | 1083.62 | HC |
| SRR2646853 | panicle | FP | 1602.61 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 958.21 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 57.66 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1418.22 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1826.55 | HC |
| SRR2646854 | panicle | SP | 1281.30 | HC |
| SRR2646855 | panicle | SP | 2642.46 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 433.43 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 154.02 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 70.58 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 115.21 | HC |
| SRR4098203 | seedling | No treatment | 111.17 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 63.75 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 68.12 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 123.43 | HC |
| SRR6365690 | seedling | Wild type | 1117.25 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 123.70 | HC |
| SRR6365692 | panicle | Wild type | 2887.81 | HC |
| SRR6365693 | panicle | Wild type | 2842.20 | HC |
| SRR6365694 | panicle | Wild type | 3160.20 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 582.43 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 389.47 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 54.67 | HC |
| SRR6810101 | seedling | seedling | 5138.91 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 128.54 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 163.40 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 143.61 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 105.04 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 135.73 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 166.27 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 149.15 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 121.29 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 567.56 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1979.62 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2849.12 | HC |
| SRR1849784 | root | Control 120min | 238.47 | HC |
| SRR6365691 | panicle | Wild type | 3098.11 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 146.84 | HC |
| SRR10690153 | leaf | IRBB5_0h | 1247.11 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 175.98 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 426.51 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 251.46 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1803.64 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 403.17 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 105.95 | HC |
| SRR3110556 | shoot | shoot control | 52.93 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 453.93 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 128.23 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 514.30 | HC |
| SRR1061616 | panicle | Normal | 688.91 | HC |
| SRR1061617 | panicle | Heat Stress | 711.73 | HC |
| SRR1061614 | panicle | Normal | 360.30 | HC |
| SRR1061615 | panicle | Heat Stress | 785.65 | HC |
| SRR1061612 | panicle | Normal | 2299.71 | HC |
| SRR1061613 | panicle | Heat Stress | 2017.08 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 35.35 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 50.21 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 209.43 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 3063.67 | HC |
| SRR1061618 | flag_leaf | Normal | 3544.34 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 2215.85 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 64.39 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 125.62 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 124.36 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 108.55 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 94.06 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 296.92 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 51.50 | HC |
| SRR3140954 | leaf | "45C, 12h" | 133.84 | HC |
| SRR089621 | panicle | cold | 195.87 | HC |
| SRR089620 | panicle | drought | 153.32 | HC |
| SRR3140957 | leaf | "45C, 24h" | 182.78 | HC |
| SRR089622 | panicle | salt | 81.99 | HC |
| SRR504360 | leaf | Nipponbare | 70.09 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 197.68 | HC |
| SRR2544786 | embryo | dry seed | 18.86 | HC |
| SRR4098172 | seedling | Cold (4C) | 80.69 | HC |
| SRR3140956 | leaf | "45C, 24h" | 529.48 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 64.97 | HC |
| SRR3140953 | leaf | "45C, 0h" | 174.70 | HC |
| SRR6810102 | seedling | seedling | 5680.28 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 48.94 | HC |
| SRR10956502 | panicle | WT | 1702.81 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 65.69 | HC |
| SRR10956501 | panicle | WT | 1645.66 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 93.58 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 455.76 | HC |
| SRR8258048 | leaf_sheath | R_bph | 208.65 | HC |
| SRR1740023 | seedling | IR64-Control | 1352.52 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 16.12 | HC |
| SRR1740025 | seedling | PK-Control | 1026.39 | HC |
| SRR1740024 | seedling | N22-Control | 732.10 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 2336.65 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 2174.07 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 46.34 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 257.81 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 181.31 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 101.86 | HC |
| SRR1654490 | leaf | wild type | 243.60 | HC |
| SRR3110557 | shoot | shoot treated | 149.01 | HC |
| SRR5940086 | panicle | Wild type | 829.34 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 74.93 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 79.59 | HC |
| SRR8258051 | leaf_sheath | R_bph | 261.34 | HC |
| SRR504362 | leaf | NPB X 93-11 | 61.95 | HC |