| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 14.32 | MC |
| SRR3140955 | leaf | "45C, 12h" | 0.60 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 7.21 | MC |
| SRR8258050 | leaf_sheath | R_bph | 3.52 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 12.82 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 11.10 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 6.08 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 2.48 | MC |
| SRR6810106 | panicle | panicle | 0.44 | MC |
| SRR7058097 | leaf | rice_mock | 2.17 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.42 | MC |
| SRR7058098 | leaf | rice_RSV | 2.95 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 4.88 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 0.18 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 1.47 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 3.82 | MC |
| SRR1061625 | panicle | Heat Stress | 0.81 | MC |
| SRR1061624 | panicle | Normal | 3.45 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 8.29 | MC |
| SRR1061622 | flag_leaf | Normal | 4.58 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 1.00 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 4.97 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 3.40 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 1.20 | MC |
| SRR1013787 | panicle | PA64s_PA | 3.95 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 0.43 | MC |
| SRR504363 | leaf | 93-11 X NPB | 7.39 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.21 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 1.65 | MC |
| SRR6810105 | panicle | panicle | 0.94 | MC |
| SRR089619 | panicle | control | 7.07 | MC |
| SRR447135 | shoot | As(III) 20 uM | 8.52 | MC |
| SRR447134 | shoot | As(III) 80 uM | 3.19 | MC |
| SRR447133 | shoot | As(III) 20 uM | 2.32 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 11.52 | MC |
| SRR447131 | root | As(III) 80 uM | 0.50 | MC |
| SRR447130 | root | As(III) 20 uM | 0.35 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1.19 | MC |
| SRR6498701 | leaf | "WT, Control" | 10.46 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 5.43 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 4.19 | MC |
| SRR3203907 | leaf | WT | 5.42 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1.77 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 0.69 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 0.32 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 3.14 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1.56 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 1.09 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 8.11 | MC |
| SRR447129 | root | As(III) 80 uM | 0.48 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 0.36 | MC |
| SRR3130370 | leaf | control 8 hour | 0.45 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 0.45 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 0.65 | MC |
| SRR7058096 | leaf | rice_mock | 2.15 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 1.37 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.38 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 9.70 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 13.44 | MC |
| SRR6365689 | seedling | Wild type | 1.11 | MC |
| SRR447136 | shoot | As(III) 80 uM | 2.11 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 17.91 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 13.51 | MC |
| SRR3140952 | leaf | "45C, 0h" | 0.78 | MC |
| SRR976171 | lamina_joint | wild type | 0.78 | MC |
| SRR4098208 | root | No treatment | 0.81 | MC |
| SRR089772 | panicle | wild-type | 12.94 | MC |
| SRR4098209 | leaf | No treatment | 2.80 | MC |
| SRR3130369 | leaf | control 8 hour | 0.60 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 12.41 | MC |
| SRR4098205 | seedling | Heat (50C) | 2.69 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 3.33 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 8.41 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 12.13 | MC |
| SRR3130365 | leaf | control 0 hour | 0.69 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 13.99 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 0.51 | MC |
| SRR3130366 | leaf | control 0 hour | 0.58 | MC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 2.13 | MC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 1.31 | MC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 1.15 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 1.22 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 1.99 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 7.37 | MC |
| SRR2862363 | leaf | mock leaf cells | 1.39 | MC |
| SRR4098207 | panicle | No treatment | 1.79 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 8.01 | MC |
| SRR6498699 | leaf | "WT, Control" | 7.68 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 5.18 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 5.54 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 3.28 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 7.15 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 8.08 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 3.81 | MC |
| SRR4098203 | seedling | No treatment | 5.74 | MC |
| SRR6365690 | seedling | Wild type | 1.05 | MC |
| SRR6365692 | panicle | Wild type | 3.68 | MC |
| SRR6365693 | panicle | Wild type | 1.82 | MC |
| SRR6365694 | panicle | Wild type | 2.96 | MC |
| SRR6810101 | seedling | seedling | 2.04 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 1.34 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 1.67 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 13.06 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 7.24 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.29 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 23.61 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 7.47 | MC |
| SRR6365691 | panicle | Wild type | 3.05 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 10.32 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 3.60 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1.68 | MC |
| SRR3110556 | shoot | shoot control | 5.89 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 11.52 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 0.45 | MC |
| SRR1061616 | panicle | Normal | 1.49 | MC |
| SRR1061617 | panicle | Heat Stress | 1.19 | MC |
| SRR1061614 | panicle | Normal | 3.49 | MC |
| SRR1061615 | panicle | Heat Stress | 1.60 | MC |
| SRR1061612 | panicle | Normal | 6.33 | MC |
| SRR1061613 | panicle | Heat Stress | 1.53 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 3.80 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 2.23 | MC |
| SRR1061618 | flag_leaf | Normal | 4.89 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 2.73 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 2.94 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 2.86 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 1.00 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 0.52 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 0.82 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 1.03 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 5.94 | MC |
| SRR089621 | panicle | cold | 2.81 | MC |
| SRR089620 | panicle | drought | 0.78 | MC |
| SRR3140957 | leaf | "45C, 24h" | 0.65 | MC |
| SRR089622 | panicle | salt | 1.96 | MC |
| SRR504361 | leaf | Nov-93 | 9.88 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 2.36 | MC |
| SRR4098172 | seedling | Cold (4C) | 7.52 | MC |
| SRR3140956 | leaf | "45C, 24h" | 0.81 | MC |
| SRR3140953 | leaf | "45C, 0h" | 2.72 | MC |
| SRR6810102 | seedling | seedling | 4.72 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 1.83 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 15.60 | MC |
| SRR8258048 | leaf_sheath | R_bph | 5.50 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 8.39 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 14.96 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 13.66 | MC |
| SRR1654490 | leaf | wild type | 1.85 | MC |
| SRR3110557 | shoot | shoot treated | 2.40 | MC |
| SRR5940086 | panicle | Wild type | 2.60 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 2.41 | MC |
| SRR8258051 | leaf_sheath | R_bph | 3.10 | MC |
| SRR504362 | leaf | NPB X 93-11 | 3.51 | MC |