| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 14.48 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 13.11 | MC |
| SRR8258050 | leaf_sheath | R_bph | 15.44 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 12.93 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 20.96 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 4.93 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 7.94 | MC |
| SRR6810106 | panicle | panicle | 2.59 | MC |
| SRR7058097 | leaf | rice_mock | 26.81 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.21 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 8.21 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 0.88 | MC |
| SRR2154077 | seedling | KDM105_seedling | 1.43 | MC |
| SRR2154074 | seed | Nipponbare_seed | 0.21 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 2.55 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 8.13 | MC |
| SRR1061625 | panicle | Heat Stress | 1.94 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 12.69 | MC |
| SRR1061622 | flag_leaf | Normal | 5.36 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 1.15 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 12.29 | MC |
| SRR10704058 | leaf | Glyphosate | 8.68 | MC |
| SRR447128 | root | As(III) 20 uM | 5.19 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 8.96 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 1.52 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 0.98 | MC |
| SRR1013787 | panicle | PA64s_PA | 7.20 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 1.58 | MC |
| SRR504363 | leaf | 93-11 X NPB | 4.05 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.37 | MC |
| SRR1013789 | panicle | 93-11_PA | 5.07 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 0.44 | MC |
| SRR6810105 | panicle | panicle | 0.75 | MC |
| SRR447135 | shoot | As(III) 20 uM | 10.34 | MC |
| SRR447134 | shoot | As(III) 80 uM | 9.37 | MC |
| SRR447133 | shoot | As(III) 20 uM | 5.34 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 4.61 | MC |
| SRR447131 | root | As(III) 80 uM | 2.17 | MC |
| SRR1849765 | leaf | Control 30min | 4.05 | MC |
| SRR1849767 | leaf | Control 30min | 4.98 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1.92 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 4.83 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 6.64 | MC |
| SRR6498701 | leaf | "WT, Control" | 9.68 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 16.17 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 7.50 | MC |
| SRR3203907 | leaf | WT | 4.58 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 5.17 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 6.93 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 7.09 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 4.00 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 5.47 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 5.85 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 7.51 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 10.26 | MC |
| SRR447129 | root | As(III) 80 uM | 1.44 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 2.29 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 3.77 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 4.26 | MC |
| SRR1849773 | leaf | Control 120min | 4.94 | MC |
| SRR1849772 | leaf | Control 120min | 3.66 | MC |
| SRR1849771 | leaf | Control 120min | 3.46 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 3.69 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 0.56 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 1.02 | MC |
| SRR3130370 | leaf | control 8 hour | 1.13 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 1.07 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 1.51 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 3.59 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 0.55 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 14.48 | MC |
| SRR6365689 | seedling | Wild type | 1.67 | MC |
| SRR447136 | shoot | As(III) 80 uM | 1.58 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 12.82 | MC |
| SRR10704060 | leaf | Glyphosate | 6.71 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 10.20 | MC |
| SRR3140952 | leaf | "45C, 0h" | 0.58 | MC |
| SRR976171 | lamina_joint | wild type | 11.26 | MC |
| SRR089774 | panicle | wild-type | 3.70 | MC |
| SRR089772 | panicle | wild-type | 3.24 | MC |
| SRR4098209 | leaf | No treatment | 13.07 | MC |
| SRR3130369 | leaf | control 8 hour | 0.86 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 0.58 | MC |
| SRR4098205 | seedling | Heat (50C) | 6.48 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 2.32 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 8.66 | MC |
| SRR3130365 | leaf | control 0 hour | 1.32 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 0.42 | MC |
| SRR3130366 | leaf | control 0 hour | 1.31 | MC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 1.94 | MC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 1.32 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 2.95 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 3.46 | MC |
| SRR2862364 | leaf | mock leaf cells | 0.65 | MC |
| SRR2862365 | leaf | mock leaf cells | 0.82 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 1.99 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 9.05 | MC |
| SRR2862363 | leaf | mock leaf cells | 7.98 | MC |
| SRR10704055 | leaf | CK | 1.85 | MC |
| SRR10704057 | leaf | CK | 4.25 | MC |
| SRR10704056 | leaf | CK | 1.03 | MC |
| SRR10704059 | leaf | Glyphosate | 1.78 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 0.88 | MC |
| SRR6498699 | leaf | "WT, Control" | 15.06 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 0.96 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 1.55 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 14.66 | MC |
| SRR10690144 | leaf | IR24_0h | 15.48 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 9.25 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 8.68 | MC |
| SRR10690143 | leaf | IR24_0h | 16.26 | MC |
| SRR10690142 | leaf | IR24_0h | 15.83 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 8.09 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 12.13 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 11.32 | MC |
| SRR4098203 | seedling | No treatment | 12.85 | MC |
| SRR6365690 | seedling | Wild type | 1.40 | MC |
| SRR6365694 | panicle | Wild type | 6.23 | MC |
| SRR6810101 | seedling | seedling | 3.49 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 5.17 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 6.03 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 13.40 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 6.86 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 2.05 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 17.62 | MC |
| SRR6365691 | panicle | Wild type | 10.03 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 6.21 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 4.75 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 5.97 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 21.38 | MC |
| SRR1061617 | panicle | Heat Stress | 3.69 | MC |
| SRR1061615 | panicle | Heat Stress | 3.71 | MC |
| SRR1061613 | panicle | Heat Stress | 3.92 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 11.17 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 2.55 | MC |
| SRR1061618 | flag_leaf | Normal | 5.56 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 4.41 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 3.54 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 3.66 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 4.84 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 4.54 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 5.84 | MC |
| SRR3140954 | leaf | "45C, 12h" | 0.28 | MC |
| SRR089620 | panicle | drought | 5.00 | MC |
| SRR3140957 | leaf | "45C, 24h" | 0.65 | MC |
| SRR504360 | leaf | Nipponbare | 1.55 | MC |
| SRR504361 | leaf | Nov-93 | 2.64 | MC |
| SRR2544786 | embryo | dry seed | 0.53 | MC |
| SRR3140956 | leaf | "45C, 24h" | 1.23 | MC |
| SRR3140953 | leaf | "45C, 0h" | 0.68 | MC |
| SRR6810102 | seedling | seedling | 4.40 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 6.64 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 0.99 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 14.30 | MC |
| SRR8258048 | leaf_sheath | R_bph | 14.58 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 0.78 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 11.31 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 15.20 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 13.90 | MC |
| SRR1654490 | leaf | wild type | 5.67 | MC |
| SRR3110557 | shoot | shoot treated | 22.45 | MC |
| SRR8258051 | leaf_sheath | R_bph | 12.81 | MC |
| SRR504362 | leaf | NPB X 93-11 | 1.45 | MC |