| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 38.52 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 24.41 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 11.95 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 26.99 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 12.38 | HC |
| SRR447128 | root | As(III) 20 uM | 29.30 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 86.98 | HC |
| SRR9070101 | shoot_base | WT_base | 5.02 | HC |
| SRR089619 | panicle | control | 11.99 | HC |
| SRR447131 | root | As(III) 80 uM | 22.55 | HC |
| SRR447130 | root | As(III) 20 uM | 109.10 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 16.59 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 9.43 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 26.55 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 10.87 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 9.24 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 57.15 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 67.55 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 73.87 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 72.12 | HC |
| SRR447129 | root | As(III) 80 uM | 11.98 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 43.21 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 40.47 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 36.38 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 105.29 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 26.50 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 25.77 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 27.60 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 24.30 | HC |
| SRR4098208 | root | No treatment | 854.22 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 53.09 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 69.39 | HC |
| SRR9070100 | shoot_base | WT_base | 5.20 | HC |
| SRR4098205 | seedling | Heat (50C) | 77.95 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 58.98 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 88.63 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 75.78 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 51.32 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 45.14 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 5.17 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 5.91 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 3.31 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 38.35 | HC |
| SRR4098207 | panicle | No treatment | 6.59 | HC |
| SRR10704057 | leaf | CK | 34.82 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 48.07 | HC |
| SRR9070102 | shoot_base | WT_base | 5.55 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 75.02 | HC |
| SRR2646852 | panicle | FP | 27.07 | HC |
| SRR2646853 | panicle | FP | 24.09 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 34.96 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 89.34 | HC |
| SRR2646854 | panicle | SP | 19.63 | HC |
| SRR2646855 | panicle | SP | 13.48 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 18.56 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 21.28 | HC |
| SRR4098203 | seedling | No treatment | 61.71 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 36.04 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 25.26 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 43.76 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 8.36 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 24.87 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 34.57 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 33.57 | HC |
| SRR1849784 | root | Control 120min | 400.62 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 24.98 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 14.40 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 32.99 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 11.95 | HC |
| SRR3110556 | shoot | shoot control | 42.79 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 112.22 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 52.59 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 780.40 | HC |
| SRR1061614 | panicle | Normal | 5.13 | HC |
| SRR1061612 | panicle | Normal | 7.10 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 26.81 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 91.29 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 72.62 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 72.97 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 140.98 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 149.22 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 80.14 | HC |
| SRR089621 | panicle | cold | 10.64 | HC |
| SRR089622 | panicle | salt | 8.40 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 112.47 | HC |
| SRR4098172 | seedling | Cold (4C) | 72.21 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 74.03 | HC |
| SRR3140953 | leaf | "45C, 0h" | 15.82 | HC |
| SRR10956502 | panicle | WT | 8.69 | HC |
| SRR10956501 | panicle | WT | 9.41 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 23.42 | HC |
| SRR1740023 | seedling | IR64-Control | 28.34 | HC |
| SRR1740025 | seedling | PK-Control | 30.43 | HC |
| SRR1740024 | seedling | N22-Control | 34.82 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 26.02 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 40.33 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 103.49 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 63.07 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 31.90 | HC |
| SRR3110557 | shoot | shoot treated | 39.84 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 19.98 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 105.33 | HC |