| SRR3140955 | leaf | "45C, 12h" | 0.20 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 0.45 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 10.52 | MC |
| SRR6810106 | panicle | panicle | 3.45 | MC |
| SRR7058097 | leaf | rice_mock | 10.49 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1.57 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 7.22 | MC |
| SRR2154074 | seed | Nipponbare_seed | 1.13 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 0.27 | MC |
| SRR2154071 | seed | KDM105_seed | 1.91 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 10.08 | MC |
| SRR1061625 | panicle | Heat Stress | 2.28 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 10.56 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 11.66 | MC |
| SRR447128 | root | As(III) 20 uM | 3.12 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 0.30 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.56 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 7.37 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 1.73 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 3.95 | MC |
| SRR1013789 | panicle | 93-11_PA | 3.02 | MC |
| SRR9070101 | shoot_base | WT_base | 3.30 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 1.10 | MC |
| SRR6810105 | panicle | panicle | 4.71 | MC |
| SRR447135 | shoot | As(III) 20 uM | 6.35 | MC |
| SRR447134 | shoot | As(III) 80 uM | 4.98 | MC |
| SRR447133 | shoot | As(III) 20 uM | 5.58 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 4.60 | MC |
| SRR447131 | root | As(III) 80 uM | 5.35 | MC |
| SRR447130 | root | As(III) 20 uM | 10.05 | MC |
| SRR1849765 | leaf | Control 30min | 21.17 | MC |
| SRR1849767 | leaf | Control 30min | 12.23 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 3.82 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 19.91 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 15.51 | MC |
| SRR6498701 | leaf | "WT, Control" | 13.16 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 3.68 | MC |
| SRR3203907 | leaf | WT | 0.68 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 12.36 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2.05 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 3.74 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.05 | MC |
| SRR447129 | root | As(III) 80 uM | 2.40 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 4.57 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 16.35 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 21.29 | MC |
| SRR1849773 | leaf | Control 120min | 20.31 | MC |
| SRR1849772 | leaf | Control 120min | 9.16 | MC |
| SRR1849771 | leaf | Control 120min | 23.71 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 15.82 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 3.33 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 8.25 | MC |
| SRR3130370 | leaf | control 8 hour | 3.00 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 9.43 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 2.59 | MC |
| SRR7058096 | leaf | rice_mock | 7.82 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.16 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.76 | MC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 1.40 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2.10 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 8.70 | MC |
| SRR6365689 | seedling | Wild type | 1.93 | MC |
| SRR447136 | shoot | As(III) 80 uM | 5.80 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 3.45 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 5.28 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 2.16 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 10.19 | MC |
| SRR2154075 | seed | Taipei309_seed | 3.08 | MC |
| SRR3140952 | leaf | "45C, 0h" | 1.17 | MC |
| SRR976171 | lamina_joint | wild type | 23.34 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 2.12 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.94 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 6.99 | MC |
| SRR9070100 | shoot_base | WT_base | 2.44 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.55 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 3.54 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2.52 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.65 | MC |
| SRR3130365 | leaf | control 0 hour | 4.65 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.02 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 2.71 | MC |
| SRR3130366 | leaf | control 0 hour | 2.05 | MC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 0.61 | MC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 0.84 | MC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 0.46 | MC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 0.42 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 0.95 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 0.91 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 0.81 | MC |
| SRR8649147 | panicle | panicle tissue | 0.24 | MC |
| SRR10704055 | leaf | CK | 10.22 | MC |
| SRR10704056 | leaf | CK | 14.09 | MC |
| SRR10704059 | leaf | Glyphosate | 5.00 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 4.18 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.47 | MC |
| SRR9070102 | shoot_base | WT_base | 1.65 | MC |
| SRR6498699 | leaf | "WT, Control" | 15.35 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 10.67 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 3.03 | MC |
| SRR10690144 | leaf | IR24_0h | 1.21 | MC |
| SRR10690142 | leaf | IR24_0h | 17.79 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 6.05 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.59 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 23.50 | MC |
| SRR2646855 | panicle | SP | 12.45 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 2.57 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 0.60 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 0.28 | MC |
| SRR6365690 | seedling | Wild type | 1.41 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 0.60 | MC |
| SRR6365692 | panicle | Wild type | 4.08 | MC |
| SRR6365693 | panicle | Wild type | 4.14 | MC |
| SRR6365694 | panicle | Wild type | 3.59 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 1.31 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 2.44 | MC |
| SRR6810101 | seedling | seedling | 13.70 | MC |
| SRR1849784 | root | Control 120min | 7.32 | MC |
| SRR6365691 | panicle | Wild type | 3.06 | MC |
| SRR3110556 | shoot | shoot control | 1.78 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.16 | MC |
| SRR1061617 | panicle | Heat Stress | 2.06 | MC |
| SRR1061615 | panicle | Heat Stress | 2.05 | MC |
| SRR1061612 | panicle | Normal | 6.61 | MC |
| SRR1061613 | panicle | Heat Stress | 2.33 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 3.23 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 3.33 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 8.71 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 9.05 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2.67 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 6.48 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.79 | MC |
| SRR3140954 | leaf | "45C, 12h" | 3.56 | MC |
| SRR089621 | panicle | cold | 9.03 | MC |
| SRR3140957 | leaf | "45C, 24h" | 11.91 | MC |
| SRR2544786 | embryo | dry seed | 2.13 | MC |
| SRR3140956 | leaf | "45C, 24h" | 3.79 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 3.97 | MC |
| SRR3140953 | leaf | "45C, 0h" | 4.62 | MC |
| SRR6810102 | seedling | seedling | 16.66 | MC |
| SRR10956502 | panicle | WT | 2.87 | MC |
| SRR10956501 | panicle | WT | 2.18 | MC |
| SRR1740025 | seedling | PK-Control | 12.87 | MC |
| SRR1740024 | seedling | N22-Control | 19.44 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 7.02 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 7.86 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 4.22 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 0.70 | MC |
| SRR1654490 | leaf | wild type | 1.62 | MC |
| SRR3110557 | shoot | shoot treated | 4.93 | MC |
| SRR5940086 | panicle | Wild type | 2.99 | MC |