| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 10398.21 | HC |
| SRR3140955 | leaf | "45C, 12h" | 308.63 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 16209.67 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 42.24 | HC |
| SRR8258050 | leaf_sheath | R_bph | 17625.61 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 4548.77 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 17515.81 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 9315.48 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 7057.05 | HC |
| SRR10690152 | leaf | IRBB5_0h | 176.74 | HC |
| SRR6810106 | panicle | panicle | 195.86 | HC |
| SRR7058097 | leaf | rice_mock | 8169.14 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 726.92 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 125.13 | HC |
| SRR7058098 | leaf | rice_RSV | 7984.63 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 556.71 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 106.04 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 118354.26 | HC |
| SRR2154077 | seedling | KDM105_seedling | 142122.28 | HC |
| SRR2154074 | seed | Nipponbare_seed | 27149.69 | HC |
| SRR10690151 | leaf | IRBB5_0h | 100.34 | HC |
| SRR2154072 | seed | Rathuwee_seed | 15135.86 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 13521.59 | HC |
| SRR2154070 | seed | Guangluai4_seed | 23174.25 | HC |
| SRR2154071 | seed | KDM105_seed | 10479.84 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 522.42 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 339.52 | HC |
| SRR1061625 | panicle | Heat Stress | 113.72 | HC |
| SRR1061624 | panicle | Normal | 490.28 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 932.47 | HC |
| SRR1061622 | flag_leaf | Normal | 2513.73 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 4983.88 | HC |
| SRR1061620 | flag_leaf | Normal | 3823.09 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 445.21 | HC |
| SRR10704058 | leaf | Glyphosate | 6556.65 | HC |
| SRR447128 | root | As(III) 20 uM | 61.23 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 181.09 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 578.11 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 43.82 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 12801.89 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 48594.67 | HC |
| SRR1013787 | panicle | PA64s_PA | 11876.26 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 16670.94 | HC |
| SRR504363 | leaf | 93-11 X NPB | 236190.30 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 804.17 | HC |
| SRR1013789 | panicle | 93-11_PA | 6018.91 | HC |
| SRR1013788 | panicle | LYP9_PA | 9453.18 | HC |
| SRR9070101 | shoot_base | WT_base | 105.24 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 102676.63 | HC |
| SRR6810105 | panicle | panicle | 185.79 | HC |
| SRR089619 | panicle | control | 185.04 | HC |
| SRR447135 | shoot | As(III) 20 uM | 463.97 | HC |
| SRR447134 | shoot | As(III) 80 uM | 164.91 | HC |
| SRR447133 | shoot | As(III) 20 uM | 549.75 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 321.30 | HC |
| SRR447131 | root | As(III) 80 uM | 118.39 | HC |
| SRR447130 | root | As(III) 20 uM | 139.52 | HC |
| SRR1849765 | leaf | Control 30min | 1971.78 | HC |
| SRR1849767 | leaf | Control 30min | 2812.69 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 418.77 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 3665.98 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 3511.49 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 8294.49 | HC |
| SRR6498701 | leaf | "WT, Control" | 6043.18 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 8141.29 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 3202.14 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 94.06 | HC |
| SRR3203907 | leaf | WT | 88898.98 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 6522.66 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 1653.02 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 1681.75 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 415.03 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 675.09 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 408.99 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 484.28 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 1123.78 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 970.93 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1063.68 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 1618.02 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 2208.69 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 34.86 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 52.57 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 60.33 | HC |
| SRR447129 | root | As(III) 80 uM | 101.81 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 709.37 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 3030.63 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 2689.24 | HC |
| SRR1849773 | leaf | Control 120min | 3593.34 | HC |
| SRR1849772 | leaf | Control 120min | 2759.55 | HC |
| SRR1849771 | leaf | Control 120min | 2041.94 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 3085.07 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 86002.41 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 41509.98 | HC |
| SRR3130370 | leaf | control 8 hour | 62198.34 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 70178.65 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 41137.07 | HC |
| SRR7058096 | leaf | rice_mock | 8419.48 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 118.46 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 204.68 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 196343.85 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 50.62 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 45.59 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 2628.69 | HC |
| SRR6365689 | seedling | Wild type | 238.85 | HC |
| SRR447136 | shoot | As(III) 80 uM | 183.96 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 28.53 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 4227.54 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 121.18 | HC |
| SRR10704060 | leaf | Glyphosate | 5780.13 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 4679.78 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 126.48 | HC |
| SRR2154075 | seed | Taipei309_seed | 23445.78 | HC |
| SRR3140952 | leaf | "45C, 0h" | 980.95 | HC |
| SRR976171 | lamina_joint | wild type | 868.08 | HC |
| SRR4098208 | root | No treatment | 2148.28 | HC |
| SRR089774 | panicle | wild-type | 56.79 | HC |
| SRR089772 | panicle | wild-type | 105.86 | HC |
| SRR4098209 | leaf | No treatment | 6866.21 | HC |
| SRR3130369 | leaf | control 8 hour | 55805.82 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 56228.73 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 82.69 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 41.85 | HC |
| SRR9070100 | shoot_base | WT_base | 134.01 | HC |
| SRR4098205 | seedling | Heat (50C) | 1904.24 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 4474.69 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 51.21 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 40.27 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 39.16 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 72.63 | HC |
| SRR3130365 | leaf | control 0 hour | 39668.74 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 76.09 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 48604.70 | HC |
| SRR3130366 | leaf | control 0 hour | 58650.75 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 326.06 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 321.77 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 187.18 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 147.63 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 77.93 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 75.78 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 227.42 | HC |
| SRR2862364 | leaf | mock leaf cells | 54282.07 | HC |
| SRR2862365 | leaf | mock leaf cells | 28804.59 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 32854.80 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 2778.99 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1619.53 | HC |
| SRR2862363 | leaf | mock leaf cells | 28175.73 | HC |
| SRR8649147 | panicle | panicle tissue | 14.62 | HC |
| SRR4098207 | panicle | No treatment | 504.10 | HC |
| SRR10704055 | leaf | CK | 748.29 | HC |
| SRR10704057 | leaf | CK | 1889.14 | HC |
| SRR10704056 | leaf | CK | 841.42 | HC |
| SRR10704059 | leaf | Glyphosate | 849.37 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 7362.91 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 31.20 | HC |
| SRR9070102 | shoot_base | WT_base | 99.18 | HC |
| SRR6498699 | leaf | "WT, Control" | 5420.87 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 134533.04 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 220717.20 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 42.72 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 442.62 | HC |
| SRR10690144 | leaf | IR24_0h | 374.92 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 413.23 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 511.92 | HC |
| SRR10690143 | leaf | IR24_0h | 242.02 | HC |
| SRR10690142 | leaf | IR24_0h | 322.99 | HC |
| SRR2646852 | panicle | FP | 10.59 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 13.83 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 31.15 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 516.59 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 719.32 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 72.81 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 307.51 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 205.29 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 592.15 | HC |
| SRR4098203 | seedling | No treatment | 3993.71 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 87.21 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 149.30 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 184.69 | HC |
| SRR6365690 | seedling | Wild type | 173.94 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 63.06 | HC |
| SRR6365692 | panicle | Wild type | 88.92 | HC |
| SRR6365693 | panicle | Wild type | 137.52 | HC |
| SRR6365694 | panicle | Wild type | 125.96 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 5997.64 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 115.79 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 448.46 | HC |
| SRR6810101 | seedling | seedling | 6039.19 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 9486.36 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 9848.38 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 260.48 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 634.44 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 8093.51 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 10669.51 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 76.28 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 519.11 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 767.84 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 375.88 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 400.12 | HC |
| SRR1849784 | root | Control 120min | 439.33 | HC |
| SRR6365691 | panicle | Wild type | 101.54 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 474.14 | HC |
| SRR10690153 | leaf | IRBB5_0h | 295.49 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 312.12 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 540.74 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 782.67 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 414.99 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1016.75 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 788.72 | HC |
| SRR3110556 | shoot | shoot control | 35221.42 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 1356.76 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 55.81 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 7477.70 | HC |
| SRR1061616 | panicle | Normal | 311.58 | HC |
| SRR1061617 | panicle | Heat Stress | 593.78 | HC |
| SRR1061614 | panicle | Normal | 387.42 | HC |
| SRR1061615 | panicle | Heat Stress | 1131.46 | HC |
| SRR1061612 | panicle | Normal | 278.69 | HC |
| SRR1061613 | panicle | Heat Stress | 380.35 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 328.13 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 41.67 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2607.17 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 3949.19 | HC |
| SRR1061618 | flag_leaf | Normal | 3391.39 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 1991.51 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 1674.39 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 1048.95 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 27.24 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 2462.96 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 6710.43 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 6140.37 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 8979.35 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 6056.96 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 30.25 | HC |
| SRR3140954 | leaf | "45C, 12h" | 2586.59 | HC |
| SRR089621 | panicle | cold | 325.94 | HC |
| SRR089620 | panicle | drought | 379.69 | HC |
| SRR3140957 | leaf | "45C, 24h" | 3616.14 | HC |
| SRR089622 | panicle | salt | 245.41 | HC |
| SRR504360 | leaf | Nipponbare | 225689.07 | HC |
| SRR504361 | leaf | Nov-93 | 203032.16 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 5599.19 | HC |
| SRR2544786 | embryo | dry seed | 3697.44 | HC |
| SRR4098172 | seedling | Cold (4C) | 1088.81 | HC |
| SRR3140956 | leaf | "45C, 24h" | 2840.26 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 45.11 | HC |
| SRR3140953 | leaf | "45C, 0h" | 1366.89 | HC |
| SRR6810102 | seedling | seedling | 7283.82 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 11651.99 | HC |
| SRR10956502 | panicle | WT | 71.58 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 60433.59 | HC |
| SRR10956501 | panicle | WT | 72.83 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 9326.73 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 431.70 | HC |
| SRR8258048 | leaf_sheath | R_bph | 18206.12 | HC |
| SRR1740023 | seedling | IR64-Control | 20640.95 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 151968.25 | HC |
| SRR1740025 | seedling | PK-Control | 15776.14 | HC |
| SRR1740024 | seedling | N22-Control | 28469.79 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 3526.22 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 2892.64 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 44.04 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 11.96 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 8447.55 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 64.81 | HC |
| SRR1654490 | leaf | wild type | 112576.28 | HC |
| SRR3110557 | shoot | shoot treated | 5147.84 | HC |
| SRR5940086 | panicle | Wild type | 128.28 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 1209.28 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1568.51 | HC |
| SRR8258051 | leaf_sheath | R_bph | 16288.46 | HC |
| SRR504362 | leaf | NPB X 93-11 | 216124.91 | HC |