| SRR3140955 | leaf | "45C, 12h" | 6.85 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 6.37 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 10.61 | MC |
| SRR10690152 | leaf | IRBB5_0h | 13.47 | MC |
| SRR6810106 | panicle | panicle | 0.87 | MC |
| SRR7058097 | leaf | rice_mock | 3.49 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1.25 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 2.84 | MC |
| SRR7058098 | leaf | rice_RSV | 3.97 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 22.58 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 1.77 | MC |
| SRR2154077 | seedling | KDM105_seedling | 3.26 | MC |
| SRR2154074 | seed | Nipponbare_seed | 5.10 | MC |
| SRR10690151 | leaf | IRBB5_0h | 10.26 | MC |
| SRR2154072 | seed | Rathuwee_seed | 3.15 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 3.77 | MC |
| SRR2154071 | seed | KDM105_seed | 1.52 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 4.30 | MC |
| SRR1061625 | panicle | Heat Stress | 0.33 | MC |
| SRR1061624 | panicle | Normal | 0.80 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 3.07 | MC |
| SRR1061622 | flag_leaf | Normal | 3.22 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 2.81 | MC |
| SRR1061620 | flag_leaf | Normal | 5.08 | MC |
| SRR10704058 | leaf | Glyphosate | 23.68 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 2.10 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.70 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 6.17 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 6.15 | MC |
| SRR1013787 | panicle | PA64s_PA | 4.64 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 7.44 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 5.03 | MC |
| SRR1013789 | panicle | 93-11_PA | 2.48 | MC |
| SRR1013788 | panicle | LYP9_PA | 3.34 | MC |
| SRR9070101 | shoot_base | WT_base | 0.13 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 4.30 | MC |
| SRR6810105 | panicle | panicle | 0.56 | MC |
| SRR447135 | shoot | As(III) 20 uM | 2.90 | MC |
| SRR447134 | shoot | As(III) 80 uM | 5.98 | MC |
| SRR447133 | shoot | As(III) 20 uM | 2.79 | MC |
| SRR1849765 | leaf | Control 30min | 4.50 | MC |
| SRR1849767 | leaf | Control 30min | 14.51 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 10.86 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 9.16 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 20.83 | MC |
| SRR6498701 | leaf | "WT, Control" | 12.01 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 15.80 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 29.94 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 1.29 | MC |
| SRR3203907 | leaf | WT | 7.85 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 10.01 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 9.97 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 5.98 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 16.44 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3.15 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 2.18 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 3.81 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 9.43 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 6.39 | MC |
| SRR1849773 | leaf | Control 120min | 12.08 | MC |
| SRR1849772 | leaf | Control 120min | 8.55 | MC |
| SRR1849771 | leaf | Control 120min | 5.93 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 13.19 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 12.48 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 4.85 | MC |
| SRR3130370 | leaf | control 8 hour | 14.35 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 14.48 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 5.41 | MC |
| SRR7058096 | leaf | rice_mock | 4.15 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.39 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 1.13 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 6.64 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2.10 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 5.80 | MC |
| SRR6365689 | seedling | Wild type | 0.55 | MC |
| SRR447136 | shoot | As(III) 80 uM | 1.32 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2.47 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 5.67 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 2.16 | MC |
| SRR10704060 | leaf | Glyphosate | 16.44 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 13.14 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 5.37 | MC |
| SRR2154075 | seed | Taipei309_seed | 2.88 | MC |
| SRR3140952 | leaf | "45C, 0h" | 8.93 | MC |
| SRR976171 | lamina_joint | wild type | 8.85 | MC |
| SRR089774 | panicle | wild-type | 9.60 | MC |
| SRR089772 | panicle | wild-type | 11.31 | MC |
| SRR4098209 | leaf | No treatment | 2.54 | MC |
| SRR3130369 | leaf | control 8 hour | 11.52 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 10.01 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2.43 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 4.06 | MC |
| SRR4098205 | seedling | Heat (50C) | 2.80 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 4.66 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2.70 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.65 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.35 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 3.94 | MC |
| SRR3130365 | leaf | control 0 hour | 12.28 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4.32 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 7.87 | MC |
| SRR3130366 | leaf | control 0 hour | 12.51 | MC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 1.32 | MC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 1.59 | MC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 1.00 | MC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 0.83 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 0.81 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 0.54 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 4.07 | MC |
| SRR2862364 | leaf | mock leaf cells | 12.97 | MC |
| SRR2862365 | leaf | mock leaf cells | 14.37 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 34.80 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 9.28 | MC |
| SRR2862363 | leaf | mock leaf cells | 26.66 | MC |
| SRR8649147 | panicle | panicle tissue | 0.86 | MC |
| SRR4098207 | panicle | No treatment | 1.69 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 4.19 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 4.11 | MC |
| SRR9070102 | shoot_base | WT_base | 0.16 | MC |
| SRR6498699 | leaf | "WT, Control" | 7.54 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 6.53 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 6.91 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.01 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 23.09 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 20.61 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 28.09 | MC |
| SRR10690143 | leaf | IR24_0h | 17.35 | MC |
| SRR2646852 | panicle | FP | 2.01 | MC |
| SRR2646853 | panicle | FP | 2.84 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 5.07 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2.91 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 24.13 | MC |
| SRR2646854 | panicle | SP | 2.89 | MC |
| SRR2646855 | panicle | SP | 2.49 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 1.41 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 5.15 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 2.65 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 4.32 | MC |
| SRR4098203 | seedling | No treatment | 1.11 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 2.19 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 5.38 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 4.28 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 4.10 | MC |
| SRR6365693 | panicle | Wild type | 0.50 | MC |
| SRR6365694 | panicle | Wild type | 0.47 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 6.44 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 1.57 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 1.99 | MC |
| SRR6810101 | seedling | seedling | 12.24 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 2.29 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 0.61 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 6.57 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 3.43 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 6.07 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 23.28 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 22.55 | MC |
| SRR1849784 | root | Control 120min | 0.52 | MC |
| SRR10690153 | leaf | IRBB5_0h | 1.94 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 5.16 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1.79 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 1.28 | MC |
| SRR1061616 | panicle | Normal | 0.24 | MC |
| SRR1061617 | panicle | Heat Stress | 0.87 | MC |
| SRR1061614 | panicle | Normal | 0.74 | MC |
| SRR1061615 | panicle | Heat Stress | 0.78 | MC |
| SRR1061612 | panicle | Normal | 1.61 | MC |
| SRR1061613 | panicle | Heat Stress | 0.90 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 2.65 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.02 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 5.95 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 7.32 | MC |
| SRR1061618 | flag_leaf | Normal | 4.33 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 1.47 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 0.41 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.44 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 6.66 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.39 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 6.51 | MC |
| SRR2544786 | embryo | dry seed | 3.83 | MC |
| SRR4098172 | seedling | Cold (4C) | 0.95 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2.38 | MC |
| SRR6810102 | seedling | seedling | 12.59 | MC |
| SRR10956502 | panicle | WT | 1.52 | MC |
| SRR10956501 | panicle | WT | 1.84 | MC |
| SRR1740023 | seedling | IR64-Control | 3.13 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 8.45 | MC |
| SRR1740025 | seedling | PK-Control | 1.92 | MC |
| SRR1740024 | seedling | N22-Control | 3.21 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 6.34 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 4.67 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.05 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 4.62 | MC |
| SRR3110557 | shoot | shoot treated | 18.66 | MC |
| SRR5940086 | panicle | Wild type | 6.77 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 2.53 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1.04 | MC |