| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 394.48 | HC |
| SRR3140955 | leaf | "45C, 12h" | 90.26 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 436.34 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 23.41 | HC |
| SRR8258050 | leaf_sheath | R_bph | 478.02 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 40.80 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 544.70 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 283.47 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 194.04 | HC |
| SRR10690152 | leaf | IRBB5_0h | 658.07 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 127.30 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 461.87 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 519.26 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 21.27 | HC |
| SRR2154077 | seedling | KDM105_seedling | 24.49 | HC |
| SRR10690151 | leaf | IRBB5_0h | 712.17 | HC |
| SRR2154072 | seed | Rathuwee_seed | 6.79 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 6.19 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 511.46 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 27.74 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 663.17 | HC |
| SRR10704058 | leaf | Glyphosate | 214.86 | HC |
| SRR447128 | root | As(III) 20 uM | 61.58 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 727.05 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 12.42 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 22.53 | HC |
| SRR1013787 | panicle | PA64s_PA | 20.97 | HC |
| SRR504363 | leaf | 93-11 X NPB | 45.75 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 178.50 | HC |
| SRR1013789 | panicle | 93-11_PA | 6.34 | HC |
| SRR1013788 | panicle | LYP9_PA | 11.61 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 31.68 | HC |
| SRR089619 | panicle | control | 23.12 | HC |
| SRR447135 | shoot | As(III) 20 uM | 47.71 | HC |
| SRR447134 | shoot | As(III) 80 uM | 47.66 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 28.58 | HC |
| SRR447131 | root | As(III) 80 uM | 86.32 | HC |
| SRR447130 | root | As(III) 20 uM | 166.44 | HC |
| SRR1849765 | leaf | Control 30min | 98.68 | HC |
| SRR1849767 | leaf | Control 30min | 67.54 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 25.45 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 115.24 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 93.41 | HC |
| SRR6498701 | leaf | "WT, Control" | 67.81 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 125.92 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 13031.48 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 35.41 | HC |
| SRR3203907 | leaf | WT | 20.14 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 74.52 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 1526.07 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 1211.47 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1005.90 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 1894.18 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1055.13 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1497.23 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 3726.83 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1920.93 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1142.88 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 2240.68 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 5073.75 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 13.71 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 13.17 | HC |
| SRR447129 | root | As(III) 80 uM | 96.07 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 30.51 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 85.49 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 146.41 | HC |
| SRR1849773 | leaf | Control 120min | 113.61 | HC |
| SRR1849772 | leaf | Control 120min | 70.22 | HC |
| SRR1849771 | leaf | Control 120min | 134.38 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 99.67 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 100.61 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 51.22 | HC |
| SRR3130370 | leaf | control 8 hour | 88.78 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 81.54 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 50.05 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 26.68 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 30.17 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 60.94 | HC |
| SRR447136 | shoot | As(III) 80 uM | 48.56 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 19.35 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 30.43 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 35.83 | HC |
| SRR10704060 | leaf | Glyphosate | 217.99 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 40.84 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 25.96 | HC |
| SRR3140952 | leaf | "45C, 0h" | 312.61 | HC |
| SRR976171 | lamina_joint | wild type | 129.15 | HC |
| SRR4098209 | leaf | No treatment | 78.92 | HC |
| SRR3130369 | leaf | control 8 hour | 95.14 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 64.53 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 17.13 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 17.23 | HC |
| SRR4098205 | seedling | Heat (50C) | 61.57 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 17.96 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 16.16 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 13.89 | HC |
| SRR3130365 | leaf | control 0 hour | 99.51 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 27.41 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 68.48 | HC |
| SRR3130366 | leaf | control 0 hour | 88.99 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 3.47 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 1.95 | HC |
| SRR2862364 | leaf | mock leaf cells | 53.87 | HC |
| SRR2862365 | leaf | mock leaf cells | 25.81 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 234.37 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 30.39 | HC |
| SRR2862363 | leaf | mock leaf cells | 171.70 | HC |
| SRR4098207 | panicle | No treatment | 13.67 | HC |
| SRR10704055 | leaf | CK | 180.27 | HC |
| SRR10704057 | leaf | CK | 448.50 | HC |
| SRR10704056 | leaf | CK | 191.12 | HC |
| SRR10704059 | leaf | Glyphosate | 66.26 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 27.50 | HC |
| SRR6498699 | leaf | "WT, Control" | 70.54 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 25.96 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 38.28 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 10.10 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1088.86 | HC |
| SRR10690144 | leaf | IR24_0h | 1968.85 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 788.81 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1114.78 | HC |
| SRR10690143 | leaf | IR24_0h | 1568.42 | HC |
| SRR10690142 | leaf | IR24_0h | 1798.38 | HC |
| SRR2646852 | panicle | FP | 60.29 | HC |
| SRR2646853 | panicle | FP | 91.06 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 39.29 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 761.62 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 913.00 | HC |
| SRR2646854 | panicle | SP | 58.89 | HC |
| SRR2646855 | panicle | SP | 64.89 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 27.24 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 19.18 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 19.97 | HC |
| SRR4098203 | seedling | No treatment | 67.97 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 23.07 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 37.53 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 31.63 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 20.12 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 222.01 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 208.55 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 324.99 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 300.62 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 41.29 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 631.41 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1225.05 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 992.84 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 793.06 | HC |
| SRR1849784 | root | Control 120min | 80.54 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 721.84 | HC |
| SRR10690153 | leaf | IRBB5_0h | 1019.04 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 647.24 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 969.52 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 913.52 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 828.20 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1386.86 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 953.85 | HC |
| SRR3110556 | shoot | shoot control | 181.72 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 5778.03 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 19.20 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 10071.44 | HC |
| SRR1061616 | panicle | Normal | 4.66 | HC |
| SRR1061617 | panicle | Heat Stress | 6.19 | HC |
| SRR1061615 | panicle | Heat Stress | 5.78 | HC |
| SRR1061613 | panicle | Heat Stress | 9.45 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 25.67 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12.11 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 15.98 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 128.25 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 287.15 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 10.80 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 158.28 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 163.99 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 140.06 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 196.48 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 14.09 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12.17 | HC |
| SRR3140954 | leaf | "45C, 12h" | 630.69 | HC |
| SRR089621 | panicle | cold | 31.71 | HC |
| SRR089620 | panicle | drought | 39.82 | HC |
| SRR3140957 | leaf | "45C, 24h" | 1528.53 | HC |
| SRR089622 | panicle | salt | 22.33 | HC |
| SRR504360 | leaf | Nipponbare | 72.63 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 15.81 | HC |
| SRR2544786 | embryo | dry seed | 10.45 | HC |
| SRR4098172 | seedling | Cold (4C) | 78.64 | HC |
| SRR3140956 | leaf | "45C, 24h" | 694.94 | HC |
| SRR3140953 | leaf | "45C, 0h" | 440.22 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 270.50 | HC |
| SRR10956502 | panicle | WT | 21.92 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 23.17 | HC |
| SRR10956501 | panicle | WT | 23.29 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 350.72 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 2184.35 | HC |
| SRR8258048 | leaf_sheath | R_bph | 501.07 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 13.12 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 48.53 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 52.21 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12.81 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 30.08 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 396.90 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 17.91 | HC |
| SRR1654490 | leaf | wild type | 21.74 | HC |
| SRR3110557 | shoot | shoot treated | 235.60 | HC |
| SRR5940086 | panicle | Wild type | 22.14 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 1143.91 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1956.02 | HC |
| SRR8258051 | leaf_sheath | R_bph | 569.07 | HC |
| SRR504362 | leaf | NPB X 93-11 | 55.23 | HC |