| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 4269.00 | HC |
| SRR3140955 | leaf | "45C, 12h" | 14.10 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 6218.87 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 39.42 | HC |
| SRR8258050 | leaf_sheath | R_bph | 4162.16 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 21500.10 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 4569.86 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 5182.50 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 5810.86 | HC |
| SRR10690152 | leaf | IRBB5_0h | 1045.06 | HC |
| SRR6810106 | panicle | panicle | 82.96 | HC |
| SRR7058097 | leaf | rice_mock | 699.74 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 37.21 | HC |
| SRR7058098 | leaf | rice_RSV | 503.33 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 284.66 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 37.48 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 576.26 | HC |
| SRR2154077 | seedling | KDM105_seedling | 675.06 | HC |
| SRR2154074 | seed | Nipponbare_seed | 357.63 | HC |
| SRR10690151 | leaf | IRBB5_0h | 839.28 | HC |
| SRR2154072 | seed | Rathuwee_seed | 104.44 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 325.25 | HC |
| SRR2154070 | seed | Guangluai4_seed | 414.62 | HC |
| SRR2154071 | seed | KDM105_seed | 156.39 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 84.33 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 285.65 | HC |
| SRR1061625 | panicle | Heat Stress | 2908.17 | HC |
| SRR1061624 | panicle | Normal | 3888.05 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 3187.46 | HC |
| SRR1061622 | flag_leaf | Normal | 4662.45 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 10093.17 | HC |
| SRR1061620 | flag_leaf | Normal | 9666.02 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 431.79 | HC |
| SRR10704058 | leaf | Glyphosate | 374.57 | HC |
| SRR447128 | root | As(III) 20 uM | 353.51 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 427.94 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 93.29 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 659.14 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 501.79 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 394.77 | HC |
| SRR1013787 | panicle | PA64s_PA | 1597.86 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 430.35 | HC |
| SRR504363 | leaf | 93-11 X NPB | 1091.79 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 28.18 | HC |
| SRR1013789 | panicle | 93-11_PA | 547.68 | HC |
| SRR1013788 | panicle | LYP9_PA | 836.87 | HC |
| SRR9070101 | shoot_base | WT_base | 66.70 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 1395.92 | HC |
| SRR6810105 | panicle | panicle | 78.61 | HC |
| SRR089619 | panicle | control | 19.74 | HC |
| SRR447135 | shoot | As(III) 20 uM | 149.82 | HC |
| SRR447134 | shoot | As(III) 80 uM | 127.81 | HC |
| SRR447133 | shoot | As(III) 20 uM | 68.57 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 54.85 | HC |
| SRR447131 | root | As(III) 80 uM | 583.87 | HC |
| SRR447130 | root | As(III) 20 uM | 1170.71 | HC |
| SRR1849765 | leaf | Control 30min | 6634.98 | HC |
| SRR1849767 | leaf | Control 30min | 5207.86 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1192.03 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 6474.61 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 1087.91 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 11657.62 | HC |
| SRR6498701 | leaf | "WT, Control" | 14303.72 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 17622.80 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 368.14 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 167.46 | HC |
| SRR3203907 | leaf | WT | 457.23 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 9812.92 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 382.33 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 146.49 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 87.49 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 110.64 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 45.14 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 90.83 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 247.88 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 212.20 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 163.81 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 299.15 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 293.67 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 709.46 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 541.87 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 613.45 | HC |
| SRR447129 | root | As(III) 80 uM | 181.58 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 1704.04 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 5777.74 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 7288.84 | HC |
| SRR1849773 | leaf | Control 120min | 4706.43 | HC |
| SRR1849772 | leaf | Control 120min | 5418.34 | HC |
| SRR1849771 | leaf | Control 120min | 6296.32 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 5341.14 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 982.16 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 328.55 | HC |
| SRR3130370 | leaf | control 8 hour | 1119.32 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 1516.18 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 498.69 | HC |
| SRR7058096 | leaf | rice_mock | 665.96 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 90.61 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 91.57 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 1084.49 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 154.81 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 673.19 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 24513.93 | HC |
| SRR6365689 | seedling | Wild type | 291.23 | HC |
| SRR447136 | shoot | As(III) 80 uM | 69.68 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 365.51 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 29737.76 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 175.03 | HC |
| SRR10704060 | leaf | Glyphosate | 210.81 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 21684.99 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 48.60 | HC |
| SRR2154075 | seed | Taipei309_seed | 394.94 | HC |
| SRR3140952 | leaf | "45C, 0h" | 84.41 | HC |
| SRR976171 | lamina_joint | wild type | 294.82 | HC |
| SRR4098208 | root | No treatment | 390.14 | HC |
| SRR089774 | panicle | wild-type | 28.04 | HC |
| SRR089772 | panicle | wild-type | 28.29 | HC |
| SRR4098209 | leaf | No treatment | 135.60 | HC |
| SRR3130369 | leaf | control 8 hour | 975.74 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 815.29 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 538.16 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 588.88 | HC |
| SRR9070100 | shoot_base | WT_base | 67.88 | HC |
| SRR4098205 | seedling | Heat (50C) | 142.62 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 612.38 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 772.24 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 537.22 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 557.91 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 976.48 | HC |
| SRR3130365 | leaf | control 0 hour | 1696.58 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 616.11 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 661.06 | HC |
| SRR3130366 | leaf | control 0 hour | 1002.01 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 105.27 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 107.41 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 71.00 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 97.30 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 62.73 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 64.74 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 94.69 | HC |
| SRR2862364 | leaf | mock leaf cells | 72.27 | HC |
| SRR2862365 | leaf | mock leaf cells | 75.16 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 380.89 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 107.02 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 220.73 | HC |
| SRR2862363 | leaf | mock leaf cells | 280.73 | HC |
| SRR8649147 | panicle | panicle tissue | 3220.89 | HC |
| SRR4098207 | panicle | No treatment | 70.73 | HC |
| SRR10704055 | leaf | CK | 306.90 | HC |
| SRR10704057 | leaf | CK | 691.26 | HC |
| SRR10704056 | leaf | CK | 369.25 | HC |
| SRR10704059 | leaf | Glyphosate | 71.26 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 4137.74 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 528.06 | HC |
| SRR9070102 | shoot_base | WT_base | 50.33 | HC |
| SRR6498699 | leaf | "WT, Control" | 14176.89 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 638.11 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 995.87 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 396.20 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 734.21 | HC |
| SRR10690144 | leaf | IR24_0h | 712.46 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 340.56 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 518.61 | HC |
| SRR10690143 | leaf | IR24_0h | 1081.83 | HC |
| SRR10690142 | leaf | IR24_0h | 1029.70 | HC |
| SRR2646852 | panicle | FP | 1292.00 | HC |
| SRR2646853 | panicle | FP | 1894.05 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 858.88 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 577.01 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 380.01 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 384.04 | HC |
| SRR2646854 | panicle | SP | 1209.24 | HC |
| SRR2646855 | panicle | SP | 1565.35 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 165.15 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 50.67 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 102.86 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 30.52 | HC |
| SRR4098203 | seedling | No treatment | 228.43 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 65.37 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 39.10 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 46.63 | HC |
| SRR6365690 | seedling | Wild type | 119.00 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 27.20 | HC |
| SRR6365692 | panicle | Wild type | 163.56 | HC |
| SRR6365693 | panicle | Wild type | 290.38 | HC |
| SRR6365694 | panicle | Wild type | 286.16 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1125.34 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 116.06 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 134.09 | HC |
| SRR6810101 | seedling | seedling | 576.07 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 3202.57 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 3680.91 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 61.83 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 68.65 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 3017.46 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 6089.67 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 28.16 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 20.70 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 50.87 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 415.35 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 291.27 | HC |
| SRR1849784 | root | Control 120min | 8388.48 | HC |
| SRR6365691 | panicle | Wild type | 152.53 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 77.40 | HC |
| SRR10690153 | leaf | IRBB5_0h | 674.12 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 45.29 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 121.58 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 123.31 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 462.84 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 99.45 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 40.69 | HC |
| SRR3110556 | shoot | shoot control | 1649.41 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 1119.51 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 486.53 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 1640.87 | HC |
| SRR1061616 | panicle | Normal | 645.61 | HC |
| SRR1061617 | panicle | Heat Stress | 2544.25 | HC |
| SRR1061614 | panicle | Normal | 1433.34 | HC |
| SRR1061615 | panicle | Heat Stress | 2518.22 | HC |
| SRR1061612 | panicle | Normal | 2520.53 | HC |
| SRR1061613 | panicle | Heat Stress | 2471.53 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 130.59 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 476.12 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 325.41 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 569.04 | HC |
| SRR1061618 | flag_leaf | Normal | 6736.37 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 9882.25 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 149.85 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 350.61 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 430.03 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 565.23 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 2998.32 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 2747.80 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 2836.49 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 2763.33 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 383.26 | HC |
| SRR3140954 | leaf | "45C, 12h" | 59.72 | HC |
| SRR089621 | panicle | cold | 27.90 | HC |
| SRR089620 | panicle | drought | 19.07 | HC |
| SRR3140957 | leaf | "45C, 24h" | 226.98 | HC |
| SRR504360 | leaf | Nipponbare | 767.66 | HC |
| SRR504361 | leaf | Nov-93 | 1100.54 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 2182.48 | HC |
| SRR2544786 | embryo | dry seed | 1183.33 | HC |
| SRR4098172 | seedling | Cold (4C) | 129.71 | HC |
| SRR3140956 | leaf | "45C, 24h" | 157.24 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 438.69 | HC |
| SRR3140953 | leaf | "45C, 0h" | 95.48 | HC |
| SRR6810102 | seedling | seedling | 703.22 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 3386.83 | HC |
| SRR10956502 | panicle | WT | 714.76 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 60.99 | HC |
| SRR10956501 | panicle | WT | 719.32 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 3693.13 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 149.93 | HC |
| SRR8258048 | leaf_sheath | R_bph | 4287.68 | HC |
| SRR1740023 | seedling | IR64-Control | 524.20 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 531.52 | HC |
| SRR1740025 | seedling | PK-Control | 434.53 | HC |
| SRR1740024 | seedling | N22-Control | 463.71 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 21153.30 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 27059.88 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 524.81 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 865.21 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 4169.78 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 116.85 | HC |
| SRR1654490 | leaf | wild type | 415.53 | HC |
| SRR3110557 | shoot | shoot treated | 1409.08 | HC |
| SRR5940086 | panicle | Wild type | 4420.05 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 284.02 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 265.01 | HC |
| SRR8258051 | leaf_sheath | R_bph | 3990.65 | HC |
| SRR504362 | leaf | NPB X 93-11 | 489.89 | HC |