| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 143.36 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 130.79 | HC |
| SRR8258050 | leaf_sheath | R_bph | 76.83 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 27.00 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 179.52 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 82.10 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 82.28 | HC |
| SRR10690152 | leaf | IRBB5_0h | 1544.90 | HC |
| SRR6810106 | panicle | panicle | 7.33 | HC |
| SRR7058097 | leaf | rice_mock | 46.89 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 347.22 | HC |
| SRR7058098 | leaf | rice_RSV | 39.68 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 236.92 | HC |
| SRR10690151 | leaf | IRBB5_0h | 1058.31 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 18.86 | HC |
| SRR1061625 | panicle | Heat Stress | 7.57 | HC |
| SRR1061624 | panicle | Normal | 12.20 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 55.61 | HC |
| SRR1061622 | flag_leaf | Normal | 10.94 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 17.84 | HC |
| SRR1061620 | flag_leaf | Normal | 15.88 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 215.31 | HC |
| SRR10704058 | leaf | Glyphosate | 268.68 | HC |
| SRR447128 | root | As(III) 20 uM | 19.43 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 525.28 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 20.37 | HC |
| SRR1013787 | panicle | PA64s_PA | 24.22 | HC |
| SRR1013789 | panicle | 93-11_PA | 6.46 | HC |
| SRR1013788 | panicle | LYP9_PA | 15.87 | HC |
| SRR9070101 | shoot_base | WT_base | 6.30 | HC |
| SRR089619 | panicle | control | 37.71 | HC |
| SRR447135 | shoot | As(III) 20 uM | 45.15 | HC |
| SRR447134 | shoot | As(III) 80 uM | 32.71 | HC |
| SRR447133 | shoot | As(III) 20 uM | 40.21 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 31.11 | HC |
| SRR447131 | root | As(III) 80 uM | 23.38 | HC |
| SRR447130 | root | As(III) 20 uM | 44.65 | HC |
| SRR1849765 | leaf | Control 30min | 49.11 | HC |
| SRR1849767 | leaf | Control 30min | 52.60 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 50.08 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 82.64 | HC |
| SRR6498701 | leaf | "WT, Control" | 43.39 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 34.31 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 99.58 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 91.84 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 71.87 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 729.98 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 503.31 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 259.79 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 462.43 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 119.13 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 336.14 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 68.27 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 302.07 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 357.53 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 679.12 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 30.27 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 8.77 | HC |
| SRR447129 | root | As(III) 80 uM | 19.41 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 72.41 | HC |
| SRR1849773 | leaf | Control 120min | 57.09 | HC |
| SRR1849771 | leaf | Control 120min | 62.74 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 50.62 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 36.21 | HC |
| SRR3130370 | leaf | control 8 hour | 23.68 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 32.73 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 25.19 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 38.00 | HC |
| SRR6365689 | seedling | Wild type | 16.63 | HC |
| SRR447136 | shoot | As(III) 80 uM | 32.99 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 24.57 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 65.06 | HC |
| SRR10704060 | leaf | Glyphosate | 255.05 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 35.49 | HC |
| SRR3140952 | leaf | "45C, 0h" | 12.41 | HC |
| SRR976171 | lamina_joint | wild type | 118.87 | HC |
| SRR3130369 | leaf | control 8 hour | 35.07 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 17.39 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 9.84 | HC |
| SRR3130365 | leaf | control 0 hour | 42.02 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 16.24 | HC |
| SRR3130366 | leaf | control 0 hour | 18.05 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 84.20 | HC |
| SRR2862363 | leaf | mock leaf cells | 54.35 | HC |
| SRR10704055 | leaf | CK | 156.04 | HC |
| SRR10704057 | leaf | CK | 442.74 | HC |
| SRR10704056 | leaf | CK | 194.51 | HC |
| SRR10704059 | leaf | Glyphosate | 45.93 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 7.93 | HC |
| SRR6498699 | leaf | "WT, Control" | 48.07 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 97.30 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 331.94 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 171.69 | HC |
| SRR10690143 | leaf | IR24_0h | 1517.04 | HC |
| SRR10690142 | leaf | IR24_0h | 19.97 | HC |
| SRR2646852 | panicle | FP | 72.60 | HC |
| SRR2646853 | panicle | FP | 90.00 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 17.78 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 384.05 | HC |
| SRR2646854 | panicle | SP | 66.84 | HC |
| SRR2646855 | panicle | SP | 103.46 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 77.29 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 12.17 | HC |
| SRR6365690 | seedling | Wild type | 18.66 | HC |
| SRR6365692 | panicle | Wild type | 35.89 | HC |
| SRR6365693 | panicle | Wild type | 15.20 | HC |
| SRR6365694 | panicle | Wild type | 16.51 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 78.95 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 19.04 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 53.54 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 49.59 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 107.36 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 84.68 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 55.33 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 199.71 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 741.94 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 118.75 | HC |
| SRR6365691 | panicle | Wild type | 29.20 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 786.88 | HC |
| SRR10690153 | leaf | IRBB5_0h | 649.72 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 460.51 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 1177.79 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 426.93 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 675.47 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 357.17 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 181.43 | HC |
| SRR3110556 | shoot | shoot control | 41.29 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 61.73 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 59.80 | HC |
| SRR1061616 | panicle | Normal | 8.52 | HC |
| SRR1061617 | panicle | Heat Stress | 14.08 | HC |
| SRR1061614 | panicle | Normal | 8.88 | HC |
| SRR1061615 | panicle | Heat Stress | 13.55 | HC |
| SRR1061612 | panicle | Normal | 12.32 | HC |
| SRR1061613 | panicle | Heat Stress | 22.52 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 20.83 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 28.45 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 104.67 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 63.44 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 53.56 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 41.06 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 36.30 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 44.67 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 9.77 | HC |
| SRR3140954 | leaf | "45C, 12h" | 38.73 | HC |
| SRR089621 | panicle | cold | 53.18 | HC |
| SRR089620 | panicle | drought | 49.96 | HC |
| SRR3140957 | leaf | "45C, 24h" | 222.99 | HC |
| SRR089622 | panicle | salt | 20.19 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 16.87 | HC |
| SRR2544786 | embryo | dry seed | 10.93 | HC |
| SRR3140956 | leaf | "45C, 24h" | 453.60 | HC |
| SRR3140953 | leaf | "45C, 0h" | 33.61 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 58.42 | HC |
| SRR10956502 | panicle | WT | 22.48 | HC |
| SRR10956501 | panicle | WT | 23.45 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 118.07 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 688.03 | HC |
| SRR8258048 | leaf_sheath | R_bph | 81.41 | HC |
| SRR1740023 | seedling | IR64-Control | 14.37 | HC |
| SRR1740025 | seedling | PK-Control | 15.56 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 33.72 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 33.43 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 38.31 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 111.75 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 13.79 | HC |
| SRR5940086 | panicle | Wild type | 19.92 | HC |
| SRR8258051 | leaf_sheath | R_bph | 64.21 | HC |