| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 0.90 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 1.24 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 1.12 | MC |
| SRR6810106 | panicle | panicle | 0.66 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.31 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 16.33 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 3.13 | MC |
| SRR9070101 | shoot_base | WT_base | 0.41 | MC |
| SRR089619 | panicle | control | 0.78 | MC |
| SRR6498701 | leaf | "WT, Control" | 1.55 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 0.98 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 1.06 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 6.80 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 0.30 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 0.35 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 0.68 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3.70 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.72 | MC |
| SRR7058096 | leaf | rice_mock | 0.84 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.08 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 7.19 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.97 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 2.73 | MC |
| SRR976171 | lamina_joint | wild type | 0.74 | MC |
| SRR4098208 | root | No treatment | 0.27 | MC |
| SRR089774 | panicle | wild-type | 2.96 | MC |
| SRR089772 | panicle | wild-type | 7.27 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 8.03 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.05 | MC |
| SRR9070100 | shoot_base | WT_base | 0.69 | MC |
| SRR4098205 | seedling | Heat (50C) | 0.48 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 8.59 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.14 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2.07 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 8.85 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 5.23 | MC |
| SRR8649147 | panicle | panicle tissue | 4.49 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 6.02 | MC |
| SRR9070102 | shoot_base | WT_base | 0.69 | MC |
| SRR6498699 | leaf | "WT, Control" | 0.84 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.41 | MC |
| SRR2646852 | panicle | FP | 0.42 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 3.45 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2.78 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 10.87 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 3.81 | MC |
| SRR4098203 | seedling | No treatment | 0.61 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 17.89 | MC |
| SRR6365690 | seedling | Wild type | 0.35 | MC |
| SRR6365692 | panicle | Wild type | 1.64 | MC |
| SRR6365694 | panicle | Wild type | 0.32 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 3.92 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.30 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 0.66 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 28.58 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 2.44 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 2.20 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 0.99 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.25 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.33 | MC |
| SRR3110556 | shoot | shoot control | 3.29 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.35 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 8.67 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 0.55 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 2.77 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 0.50 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 0.40 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2.29 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 1.23 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.68 | MC |
| SRR089621 | panicle | cold | 2.81 | MC |
| SRR089620 | panicle | drought | 4.38 | MC |
| SRR089622 | panicle | salt | 1.61 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 0.50 | MC |
| SRR2544786 | embryo | dry seed | 0.28 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.43 | MC |
| SRR10956502 | panicle | WT | 0.32 | MC |
| SRR10956501 | panicle | WT | 0.40 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 1.50 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 0.24 | MC |
| SRR8258048 | leaf_sheath | R_bph | 1.20 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.36 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.93 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 1.70 | MC |
| SRR3110557 | shoot | shoot treated | 2.54 | MC |
| SRR5940086 | panicle | Wild type | 0.39 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.65 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.80 | MC |
| SRR8258051 | leaf_sheath | R_bph | 0.60 | MC |