| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 214.66 | HC |
| SRR3140955 | leaf | "45C, 12h" | 285.87 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 242.91 | HC |
| SRR8258050 | leaf_sheath | R_bph | 184.76 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 69.08 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 488.98 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 49.32 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 32.98 | HC |
| SRR10690152 | leaf | IRBB5_0h | 677.65 | HC |
| SRR6810106 | panicle | panicle | 20.05 | HC |
| SRR7058097 | leaf | rice_mock | 362.10 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 254.85 | HC |
| SRR7058098 | leaf | rice_RSV | 435.19 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1938.10 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 37.25 | HC |
| SRR2154077 | seedling | KDM105_seedling | 28.40 | HC |
| SRR10690151 | leaf | IRBB5_0h | 710.47 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 1593.75 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1330.92 | HC |
| SRR1061625 | panicle | Heat Stress | 13.01 | HC |
| SRR1061624 | panicle | Normal | 30.65 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 2698.35 | HC |
| SRR1061622 | flag_leaf | Normal | 58.45 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 60.33 | HC |
| SRR1061620 | flag_leaf | Normal | 66.28 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1110.80 | HC |
| SRR10704058 | leaf | Glyphosate | 8269.42 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1652.48 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 23.51 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 54.66 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 30.64 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 20.50 | HC |
| SRR9070101 | shoot_base | WT_base | 40.77 | HC |
| SRR6810105 | panicle | panicle | 17.32 | HC |
| SRR089619 | panicle | control | 41.72 | HC |
| SRR447135 | shoot | As(III) 20 uM | 2743.53 | HC |
| SRR447134 | shoot | As(III) 80 uM | 860.37 | HC |
| SRR447133 | shoot | As(III) 20 uM | 2874.31 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 981.86 | HC |
| SRR1849765 | leaf | Control 30min | 173.93 | HC |
| SRR1849767 | leaf | Control 30min | 166.82 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 560.08 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 141.78 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 270.92 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 76.88 | HC |
| SRR6498701 | leaf | "WT, Control" | 81.75 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 71.93 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 151.83 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 30.06 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 73.78 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 2813.00 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 3509.32 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1337.01 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 953.99 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 3093.77 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 2230.04 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 2382.18 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 2874.40 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 4812.46 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 4878.29 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 56.63 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 218.90 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 122.59 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 132.01 | HC |
| SRR1849773 | leaf | Control 120min | 185.53 | HC |
| SRR1849772 | leaf | Control 120min | 103.19 | HC |
| SRR1849771 | leaf | Control 120min | 132.89 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 116.02 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 44.54 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 67.27 | HC |
| SRR3130370 | leaf | control 8 hour | 76.97 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 91.43 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 32.56 | HC |
| SRR7058096 | leaf | rice_mock | 143.24 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 31.74 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 28.69 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 25.63 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 11.94 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 67.78 | HC |
| SRR6365689 | seedling | Wild type | 84.25 | HC |
| SRR447136 | shoot | As(III) 80 uM | 868.08 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 56.36 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 16.80 | HC |
| SRR10704060 | leaf | Glyphosate | 7255.54 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 80.84 | HC |
| SRR3140952 | leaf | "45C, 0h" | 3189.51 | HC |
| SRR976171 | lamina_joint | wild type | 622.57 | HC |
| SRR4098208 | root | No treatment | 30.56 | HC |
| SRR4098209 | leaf | No treatment | 2729.62 | HC |
| SRR3130369 | leaf | control 8 hour | 108.08 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 91.34 | HC |
| SRR9070100 | shoot_base | WT_base | 32.04 | HC |
| SRR4098205 | seedling | Heat (50C) | 1932.76 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 388.05 | HC |
| SRR3130365 | leaf | control 0 hour | 211.98 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 139.33 | HC |
| SRR3130366 | leaf | control 0 hour | 177.10 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 75.21 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 82.99 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 81.38 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 17.77 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 14.58 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 14.64 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 21.57 | HC |
| SRR2862364 | leaf | mock leaf cells | 155.73 | HC |
| SRR2862365 | leaf | mock leaf cells | 117.79 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 174.03 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 224.60 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 833.82 | HC |
| SRR2862363 | leaf | mock leaf cells | 100.06 | HC |
| SRR4098207 | panicle | No treatment | 3256.06 | HC |
| SRR10704055 | leaf | CK | 2576.53 | HC |
| SRR10704057 | leaf | CK | 3663.18 | HC |
| SRR10704056 | leaf | CK | 2074.73 | HC |
| SRR10704059 | leaf | Glyphosate | 601.75 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 52.80 | HC |
| SRR9070102 | shoot_base | WT_base | 24.31 | HC |
| SRR6498699 | leaf | "WT, Control" | 78.05 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 29.64 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 26.70 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 971.23 | HC |
| SRR10690144 | leaf | IR24_0h | 485.21 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 3702.51 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1216.71 | HC |
| SRR10690143 | leaf | IR24_0h | 597.35 | HC |
| SRR10690142 | leaf | IR24_0h | 496.11 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1821.37 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1525.01 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 24.15 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 25.67 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 14.48 | HC |
| SRR4098203 | seedling | No treatment | 1092.77 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 27.85 | HC |
| SRR6365690 | seedling | Wild type | 85.89 | HC |
| SRR6365692 | panicle | Wild type | 33.85 | HC |
| SRR6365693 | panicle | Wild type | 38.03 | HC |
| SRR6365694 | panicle | Wild type | 37.09 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 193.42 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 34.76 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 40.82 | HC |
| SRR6810101 | seedling | seedling | 187.72 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 38.92 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 36.78 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 9.13 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 136.61 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 41.59 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 406.69 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1204.11 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1618.38 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1614.77 | HC |
| SRR6365691 | panicle | Wild type | 30.51 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 317.36 | HC |
| SRR10690153 | leaf | IRBB5_0h | 1335.15 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 559.56 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 338.34 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 1607.51 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1105.03 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 2594.74 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1464.89 | HC |
| SRR3110556 | shoot | shoot control | 226.03 | HC |
| SRR1061616 | panicle | Normal | 16.50 | HC |
| SRR1061617 | panicle | Heat Stress | 22.39 | HC |
| SRR1061614 | panicle | Normal | 10.10 | HC |
| SRR1061615 | panicle | Heat Stress | 19.13 | HC |
| SRR1061612 | panicle | Normal | 32.65 | HC |
| SRR1061613 | panicle | Heat Stress | 40.80 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 17.11 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2203.70 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 322.21 | HC |
| SRR1061618 | flag_leaf | Normal | 113.23 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 48.57 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 240.57 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 271.36 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 28.69 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 48.61 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 44.26 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 59.00 | HC |
| SRR3140954 | leaf | "45C, 12h" | 3568.72 | HC |
| SRR089621 | panicle | cold | 177.20 | HC |
| SRR089620 | panicle | drought | 100.72 | HC |
| SRR3140957 | leaf | "45C, 24h" | 4711.95 | HC |
| SRR089622 | panicle | salt | 38.94 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 8.01 | HC |
| SRR2544786 | embryo | dry seed | 21.46 | HC |
| SRR4098172 | seedling | Cold (4C) | 5707.64 | HC |
| SRR3140956 | leaf | "45C, 24h" | 824.43 | HC |
| SRR3140953 | leaf | "45C, 0h" | 4200.70 | HC |
| SRR6810102 | seedling | seedling | 241.72 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 46.49 | HC |
| SRR10956502 | panicle | WT | 26.32 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 126.72 | HC |
| SRR10956501 | panicle | WT | 28.23 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 159.36 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 925.70 | HC |
| SRR8258048 | leaf_sheath | R_bph | 183.83 | HC |
| SRR1740023 | seedling | IR64-Control | 72.70 | HC |
| SRR1740025 | seedling | PK-Control | 611.42 | HC |
| SRR1740024 | seedling | N22-Control | 124.78 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 80.68 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 73.65 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 154.71 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 4.92 | HC |
| SRR1654490 | leaf | wild type | 24.77 | HC |
| SRR3110557 | shoot | shoot treated | 335.21 | HC |
| SRR5940086 | panicle | Wild type | 15.49 | HC |
| SRR8258051 | leaf_sheath | R_bph | 134.51 | HC |