| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 58.03 | HC |
| SRR3140955 | leaf | "45C, 12h" | 16.12 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 48.02 | HC |
| SRR8258050 | leaf_sheath | R_bph | 54.91 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 77.83 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 35.33 | HC |
| SRR10690152 | leaf | IRBB5_0h | 161.67 | HC |
| SRR6810106 | panicle | panicle | 15.32 | HC |
| SRR7058097 | leaf | rice_mock | 2940.48 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 65.15 | HC |
| SRR7058098 | leaf | rice_RSV | 1846.05 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 401.11 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 129.69 | HC |
| SRR2154077 | seedling | KDM105_seedling | 127.18 | HC |
| SRR10690151 | leaf | IRBB5_0h | 250.79 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 12.38 | HC |
| SRR2154070 | seed | Guangluai4_seed | 13.47 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 617.28 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 103.69 | HC |
| SRR1061625 | panicle | Heat Stress | 8.30 | HC |
| SRR1061624 | panicle | Normal | 43.26 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 302.35 | HC |
| SRR1061622 | flag_leaf | Normal | 395.58 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 142.09 | HC |
| SRR1061620 | flag_leaf | Normal | 475.28 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 336.15 | HC |
| SRR10704058 | leaf | Glyphosate | 471.93 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 553.98 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 600.41 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 596.99 | HC |
| SRR1013787 | panicle | PA64s_PA | 62.58 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 432.07 | HC |
| SRR504363 | leaf | 93-11 X NPB | 7133.80 | HC |
| SRR1013789 | panicle | 93-11_PA | 24.53 | HC |
| SRR1013788 | panicle | LYP9_PA | 39.39 | HC |
| SRR9070101 | shoot_base | WT_base | 94.31 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 775.77 | HC |
| SRR6810105 | panicle | panicle | 13.17 | HC |
| SRR089619 | panicle | control | 16.61 | HC |
| SRR447135 | shoot | As(III) 20 uM | 199.69 | HC |
| SRR447134 | shoot | As(III) 80 uM | 105.49 | HC |
| SRR447133 | shoot | As(III) 20 uM | 156.89 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 211.81 | HC |
| SRR1849765 | leaf | Control 30min | 888.11 | HC |
| SRR1849767 | leaf | Control 30min | 592.11 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 437.85 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 678.76 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 92.16 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 307.43 | HC |
| SRR6498701 | leaf | "WT, Control" | 236.35 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 349.70 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 176.29 | HC |
| SRR3203907 | leaf | WT | 118.11 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 378.35 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 378.57 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 505.62 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 36.69 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 32.20 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 83.66 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 75.36 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 90.02 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 94.16 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 185.89 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 280.81 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 48.08 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 8.42 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 631.56 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 672.62 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 641.56 | HC |
| SRR1849773 | leaf | Control 120min | 834.26 | HC |
| SRR1849772 | leaf | Control 120min | 707.13 | HC |
| SRR1849771 | leaf | Control 120min | 798.40 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 712.47 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 156.30 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 172.07 | HC |
| SRR3130370 | leaf | control 8 hour | 233.78 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 164.09 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 112.94 | HC |
| SRR7058096 | leaf | rice_mock | 1934.79 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 7.40 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 7.18 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 105.23 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 73.93 | HC |
| SRR6365689 | seedling | Wild type | 168.20 | HC |
| SRR447136 | shoot | As(III) 80 uM | 349.69 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 63.80 | HC |
| SRR10704060 | leaf | Glyphosate | 526.53 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 99.95 | HC |
| SRR3140952 | leaf | "45C, 0h" | 123.40 | HC |
| SRR976171 | lamina_joint | wild type | 547.44 | HC |
| SRR4098209 | leaf | No treatment | 1310.70 | HC |
| SRR3130369 | leaf | control 8 hour | 280.06 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 241.97 | HC |
| SRR9070100 | shoot_base | WT_base | 92.00 | HC |
| SRR4098205 | seedling | Heat (50C) | 1471.70 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 516.86 | HC |
| SRR3130365 | leaf | control 0 hour | 366.55 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 271.46 | HC |
| SRR3130366 | leaf | control 0 hour | 436.11 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 12.08 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 14.09 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 17.69 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 5.70 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 4.63 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 5.15 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 7.73 | HC |
| SRR2862364 | leaf | mock leaf cells | 300.29 | HC |
| SRR2862365 | leaf | mock leaf cells | 263.08 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 528.75 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 458.29 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 555.72 | HC |
| SRR2862363 | leaf | mock leaf cells | 485.31 | HC |
| SRR4098207 | panicle | No treatment | 257.69 | HC |
| SRR10704055 | leaf | CK | 225.35 | HC |
| SRR10704057 | leaf | CK | 348.15 | HC |
| SRR10704056 | leaf | CK | 183.68 | HC |
| SRR10704059 | leaf | Glyphosate | 86.24 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 29.12 | HC |
| SRR9070102 | shoot_base | WT_base | 92.77 | HC |
| SRR6498699 | leaf | "WT, Control" | 217.01 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 62.73 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 134.10 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 37.57 | HC |
| SRR10690144 | leaf | IR24_0h | 30.87 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 453.41 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 408.41 | HC |
| SRR10690143 | leaf | IR24_0h | 264.90 | HC |
| SRR10690142 | leaf | IR24_0h | 61.61 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 640.12 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 313.61 | HC |
| SRR4098203 | seedling | No treatment | 696.93 | HC |
| SRR6365690 | seedling | Wild type | 158.80 | HC |
| SRR6365692 | panicle | Wild type | 17.13 | HC |
| SRR6365693 | panicle | Wild type | 17.67 | HC |
| SRR6365694 | panicle | Wild type | 18.22 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 179.80 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 3.06 | HC |
| SRR6810101 | seedling | seedling | 199.70 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 45.98 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 26.60 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 55.39 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 146.49 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 685.45 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 303.19 | HC |
| SRR6365691 | panicle | Wild type | 16.56 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 13.83 | HC |
| SRR10690153 | leaf | IRBB5_0h | 245.64 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 25.85 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 19.99 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 49.06 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 509.78 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 128.96 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 62.90 | HC |
| SRR3110556 | shoot | shoot control | 312.02 | HC |
| SRR1061616 | panicle | Normal | 30.61 | HC |
| SRR1061617 | panicle | Heat Stress | 14.07 | HC |
| SRR1061614 | panicle | Normal | 16.81 | HC |
| SRR1061615 | panicle | Heat Stress | 10.45 | HC |
| SRR1061612 | panicle | Normal | 19.35 | HC |
| SRR1061613 | panicle | Heat Stress | 20.86 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 9.62 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 553.10 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 442.13 | HC |
| SRR1061618 | flag_leaf | Normal | 763.19 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 164.81 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 15.75 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 31.73 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 7.99 | HC |
| SRR3140954 | leaf | "45C, 12h" | 67.65 | HC |
| SRR089621 | panicle | cold | 43.95 | HC |
| SRR089620 | panicle | drought | 26.86 | HC |
| SRR3140957 | leaf | "45C, 24h" | 152.05 | HC |
| SRR089622 | panicle | salt | 12.15 | HC |
| SRR504360 | leaf | Nipponbare | 6689.58 | HC |
| SRR504361 | leaf | Nov-93 | 4342.24 | HC |
| SRR2544786 | embryo | dry seed | 9.00 | HC |
| SRR4098172 | seedling | Cold (4C) | 841.45 | HC |
| SRR3140956 | leaf | "45C, 24h" | 53.45 | HC |
| SRR3140953 | leaf | "45C, 0h" | 178.30 | HC |
| SRR6810102 | seedling | seedling | 259.69 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 33.10 | HC |
| SRR10956502 | panicle | WT | 8.46 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 267.77 | HC |
| SRR10956501 | panicle | WT | 8.07 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 46.19 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 50.61 | HC |
| SRR8258048 | leaf_sheath | R_bph | 69.12 | HC |
| SRR1740023 | seedling | IR64-Control | 113.21 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 40.95 | HC |
| SRR1740025 | seedling | PK-Control | 290.68 | HC |
| SRR1740024 | seedling | N22-Control | 607.07 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 92.78 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 58.36 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 42.33 | HC |
| SRR1654490 | leaf | wild type | 128.80 | HC |
| SRR3110557 | shoot | shoot treated | 588.22 | HC |
| SRR5940086 | panicle | Wild type | 12.50 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 7.32 | HC |
| SRR8258051 | leaf_sheath | R_bph | 73.42 | HC |
| SRR504362 | leaf | NPB X 93-11 | 7280.88 | HC |