| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 8.57 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 5.07 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 3.57 | MC |
| SRR8258050 | leaf_sheath | R_bph | 18.13 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 11.10 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 8.05 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 6.00 | MC |
| SRR10690152 | leaf | IRBB5_0h | 6.70 | MC |
| SRR7058097 | leaf | rice_mock | 16.00 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1.10 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.71 | MC |
| SRR7058098 | leaf | rice_RSV | 15.57 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 13.86 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 4.64 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 4.31 | MC |
| SRR2154077 | seedling | KDM105_seedling | 7.31 | MC |
| SRR2154074 | seed | Nipponbare_seed | 2.52 | MC |
| SRR10690151 | leaf | IRBB5_0h | 5.76 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 1.71 | MC |
| SRR2154070 | seed | Guangluai4_seed | 0.67 | MC |
| SRR2154071 | seed | KDM105_seed | 0.49 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.37 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 7.80 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 8.03 | MC |
| SRR10704058 | leaf | Glyphosate | 5.60 | MC |
| SRR447128 | root | As(III) 20 uM | 1.04 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 11.62 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 11.08 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 14.42 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 14.47 | MC |
| SRR1013787 | panicle | PA64s_PA | 8.02 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 13.64 | MC |
| SRR504363 | leaf | 93-11 X NPB | 1.44 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.57 | MC |
| SRR1013789 | panicle | 93-11_PA | 1.19 | MC |
| SRR1013788 | panicle | LYP9_PA | 3.54 | MC |
| SRR9070101 | shoot_base | WT_base | 1.48 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 13.34 | MC |
| SRR089619 | panicle | control | 0.56 | MC |
| SRR447135 | shoot | As(III) 20 uM | 3.26 | MC |
| SRR447134 | shoot | As(III) 80 uM | 1.00 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 7.61 | MC |
| SRR447131 | root | As(III) 80 uM | 1.33 | MC |
| SRR447130 | root | As(III) 20 uM | 2.43 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 14.64 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 3.81 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 9.78 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 2.76 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 3.04 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1.09 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 2.91 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 7.34 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 5.14 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 3.60 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 6.54 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 2.51 | MC |
| SRR447129 | root | As(III) 80 uM | 0.72 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 4.04 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 2.04 | MC |
| SRR3130370 | leaf | control 8 hour | 5.02 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 5.05 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 2.23 | MC |
| SRR7058096 | leaf | rice_mock | 17.67 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 4.35 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 8.97 | MC |
| SRR6365689 | seedling | Wild type | 12.21 | MC |
| SRR447136 | shoot | As(III) 80 uM | 2.89 | MC |
| SRR10704060 | leaf | Glyphosate | 4.15 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 5.51 | MC |
| SRR2154075 | seed | Taipei309_seed | 1.70 | MC |
| SRR3140952 | leaf | "45C, 0h" | 6.21 | MC |
| SRR976171 | lamina_joint | wild type | 5.55 | MC |
| SRR4098208 | root | No treatment | 0.81 | MC |
| SRR089774 | panicle | wild-type | 1.48 | MC |
| SRR089772 | panicle | wild-type | 0.81 | MC |
| SRR4098209 | leaf | No treatment | 2.70 | MC |
| SRR3130369 | leaf | control 8 hour | 2.97 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 3.00 | MC |
| SRR9070100 | shoot_base | WT_base | 0.83 | MC |
| SRR4098205 | seedling | Heat (50C) | 0.98 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 14.43 | MC |
| SRR3130365 | leaf | control 0 hour | 6.24 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 3.11 | MC |
| SRR3130366 | leaf | control 0 hour | 6.32 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 3.25 | MC |
| SRR2862364 | leaf | mock leaf cells | 6.23 | MC |
| SRR2862365 | leaf | mock leaf cells | 6.85 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 10.59 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1.66 | MC |
| SRR2862363 | leaf | mock leaf cells | 19.06 | MC |
| SRR4098207 | panicle | No treatment | 0.65 | MC |
| SRR10704055 | leaf | CK | 4.66 | MC |
| SRR10704057 | leaf | CK | 7.96 | MC |
| SRR10704056 | leaf | CK | 4.28 | MC |
| SRR10704059 | leaf | Glyphosate | 1.25 | MC |
| SRR9070102 | shoot_base | WT_base | 0.51 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 9.89 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 7.56 | MC |
| SRR10690144 | leaf | IR24_0h | 7.11 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 8.99 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 8.18 | MC |
| SRR10690143 | leaf | IR24_0h | 6.20 | MC |
| SRR10690142 | leaf | IR24_0h | 9.77 | MC |
| SRR2646852 | panicle | FP | 3.19 | MC |
| SRR2646853 | panicle | FP | 2.13 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 13.33 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 14.78 | MC |
| SRR2646854 | panicle | SP | 0.83 | MC |
| SRR2646855 | panicle | SP | 0.84 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 4.44 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 4.71 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 1.77 | MC |
| SRR4098203 | seedling | No treatment | 2.35 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 6.28 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 3.08 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 7.38 | MC |
| SRR6365690 | seedling | Wild type | 8.79 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 3.34 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 2.52 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 3.76 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 9.17 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 9.53 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 6.15 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 5.43 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 3.12 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 5.31 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 18.16 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 14.73 | MC |
| SRR1849784 | root | Control 120min | 15.16 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 2.14 | MC |
| SRR10690153 | leaf | IRBB5_0h | 0.84 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 2.18 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 1.83 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 2.85 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 2.62 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1.97 | MC |
| SRR3110556 | shoot | shoot control | 8.49 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.35 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 1.20 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 1.92 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 11.19 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 6.75 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 2.99 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 2.74 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 3.86 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 5.02 | MC |
| SRR3140954 | leaf | "45C, 12h" | 1.86 | MC |
| SRR089621 | panicle | cold | 1.00 | MC |
| SRR089620 | panicle | drought | 2.20 | MC |
| SRR3140957 | leaf | "45C, 24h" | 6.36 | MC |
| SRR089622 | panicle | salt | 0.90 | MC |
| SRR504361 | leaf | Nov-93 | 1.32 | MC |
| SRR4098172 | seedling | Cold (4C) | 2.28 | MC |
| SRR3140956 | leaf | "45C, 24h" | 1.49 | MC |
| SRR3140953 | leaf | "45C, 0h" | 7.64 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 4.95 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 5.53 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 8.30 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 4.23 | MC |
| SRR8258048 | leaf_sheath | R_bph | 15.43 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 10.89 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 8.05 | MC |
| SRR3110557 | shoot | shoot treated | 7.45 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.32 | MC |
| SRR8258051 | leaf_sheath | R_bph | 8.11 | MC |
| SRR504362 | leaf | NPB X 93-11 | 2.03 | MC |