| SRR8258050 | leaf_sheath | R_bph | 0.28 | LC |
| SRR8258058 | leaf_sheath | R_bph_late | 0.13 | LC |
| SRR10690152 | leaf | IRBB5_0h | 0.08 | LC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.15 | LC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.10 | LC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.15 | LC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 0.14 | LC |
| SRR2154076 | seedling | Guangluai4_seedling | 0.16 | LC |
| SRR2154074 | seed | Nipponbare_seed | 0.14 | LC |
| SRR10690151 | leaf | IRBB5_0h | 0.12 | LC |
| SRR2154070 | seed | Guangluai4_seed | 0.06 | LC |
| SRR2154071 | seed | KDM105_seed | 0.13 | LC |
| SRR4098204 | seedling | Drought (air-dried) | 0.06 | LC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.04 | LC |
| SRR1612403 | leaf | WT wild type (miRNA) | 0.10 | LC |
| SRR1061621 | flag_leaf | Heat Stress | 0.14 | LC |
| SRR1061620 | flag_leaf | Normal | 0.06 | LC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.15 | LC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.13 | LC |
| SRR1013786 | flag_leaf | 93-11_FL | 0.21 | LC |
| SRR504363 | leaf | 93-11 X NPB | 0.48 | LC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.05 | LC |
| SRR6810105 | panicle | panicle | 0.19 | LC |
| SRR089619 | panicle | control | 0.11 | LC |
| SRR447135 | shoot | As(III) 20 uM | 0.18 | LC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 0.60 | LC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 0.12 | LC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 0.18 | LC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 0.29 | LC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.09 | LC |
| SRR12416744 | blade | sRNA_Blade_S3 | 0.05 | LC |
| SRR12416747 | blade | sRNA_Blade_S4 | 0.10 | LC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 0.17 | LC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.27 | LC |
| SRR1849773 | leaf | Control 120min | 0.55 | LC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 0.07 | LC |
| SRR3130370 | leaf | control 8 hour | 0.12 | LC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 0.23 | LC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 0.07 | LC |
| SRR2154075 | seed | Taipei309_seed | 0.06 | LC |
| SRR976171 | lamina_joint | wild type | 0.09 | LC |
| SRR4098209 | leaf | No treatment | 0.24 | LC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.07 | LC |
| SRR4098205 | seedling | Heat (50C) | 0.12 | LC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.21 | LC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.18 | LC |
| SRR3130365 | leaf | control 0 hour | 0.12 | LC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.23 | LC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 0.17 | LC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 0.10 | LC |
| SRR1742990 | endosperm | 4X_En_sRNA | 0.20 | LC |
| SRR2862364 | leaf | mock leaf cells | 0.16 | LC |
| SRR2862363 | leaf | mock leaf cells | 0.70 | LC |
| SRR4098207 | panicle | No treatment | 0.09 | LC |
| SRR10704057 | leaf | CK | 0.09 | LC |
| SRR1061623 | flag_leaf | Heat Stress | 0.18 | LC |
| SRR9070102 | shoot_base | WT_base | 0.12 | LC |
| SRR6498699 | leaf | "WT, Control" | 0.28 | LC |
| SRR2154078 | seedling | Rathuwee_seedling | 0.40 | LC |
| SRR2154079 | seedling | Heukgyeong_seedling | 0.44 | LC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.22 | LC |
| SRR10690144 | leaf | IR24_0h | 0.10 | LC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.20 | LC |
| SRR10690143 | leaf | IR24_0h | 0.04 | LC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.27 | LC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.04 | LC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.24 | LC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 0.23 | LC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 0.15 | LC |
| SRR4098203 | seedling | No treatment | 0.24 | LC |
| SRR6365693 | panicle | Wild type | 0.17 | LC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 0.26 | LC |
| SRR6810101 | seedling | seedling | 0.29 | LC |
| SRR8258060 | leaf_sheath | R_bph_late | 0.09 | LC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.05 | LC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.05 | LC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.11 | LC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.12 | LC |
| SRR6365691 | panicle | Wild type | 0.44 | LC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.04 | LC |
| SRR10690153 | leaf | IRBB5_0h | 0.12 | LC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.05 | LC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.14 | LC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 0.10 | LC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 0.14 | LC |
| SRR3110556 | shoot | shoot control | 0.28 | LC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.05 | LC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 0.19 | LC |
| SRR1061616 | panicle | Normal | 0.08 | LC |
| SRR1061614 | panicle | Normal | 0.10 | LC |
| SRR1061615 | panicle | Heat Stress | 0.06 | LC |
| SRR1061613 | panicle | Heat Stress | 0.05 | LC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 0.14 | LC |
| SRR1061618 | flag_leaf | Normal | 0.11 | LC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.14 | LC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 0.12 | LC |
| SRR2544788 | embryo | 24 hours imbibition | 0.10 | LC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.11 | LC |
| SRR504360 | leaf | Nipponbare | 0.52 | LC |
| SRR2544787 | embryo | 12 hours imbibition | 0.08 | LC |
| SRR2544786 | embryo | dry seed | 0.05 | LC |
| SRR4098172 | seedling | Cold (4C) | 0.12 | LC |
| SRR6810102 | seedling | seedling | 0.63 | LC |
| SRR10956501 | panicle | WT | 0.08 | LC |
| SRR8258048 | leaf_sheath | R_bph | 0.11 | LC |
| SRR2154080 | seedling | Nipponbare_seedling | 0.24 | LC |
| SRR5120080 | leaf_sheath | PC_6 | 0.11 | LC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.03 | LC |
| SRR1654490 | leaf | wild type | 0.12 | LC |
| SRR3110557 | shoot | shoot treated | 0.13 | LC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.04 | LC |
| SRR504362 | leaf | NPB X 93-11 | 0.29 | LC |