| SRR1849774 | leaf | Margaporthe oryzae 120min | 7.98 | MC |
| SRR1849773 | leaf | Control 120min | 8.24 | MC |
| SRR1849772 | leaf | Control 120min | 6.11 | MC |
| SRR1849771 | leaf | Control 120min | 11.35 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 10.02 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 6.66 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 3.09 | MC |
| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 3.55 | MC |
| SRR3140955 | leaf | "45C, 12h" | 0.60 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 5.57 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 0.30 | MC |
| SRR8258050 | leaf_sheath | R_bph | 14.21 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 0.87 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 6.16 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 3.96 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 3.00 | MC |
| SRR10690152 | leaf | IRBB5_0h | 6.53 | MC |
| SRR7058097 | leaf | rice_mock | 5.24 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.58 | MC |
| SRR7058098 | leaf | rice_RSV | 3.84 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 7.36 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 3.00 | MC |
| SRR2154077 | seedling | KDM105_seedling | 2.07 | MC |
| SRR2154074 | seed | Nipponbare_seed | 0.34 | MC |
| SRR10690151 | leaf | IRBB5_0h | 9.22 | MC |
| SRR2154072 | seed | Rathuwee_seed | 0.24 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 0.18 | MC |
| SRR2154071 | seed | KDM105_seed | 0.83 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 1.92 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 6.99 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1.64 | MC |
| SRR1061622 | flag_leaf | Normal | 1.91 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 1.87 | MC |
| SRR1061620 | flag_leaf | Normal | 1.52 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 11.82 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 13.57 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 6.01 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 4.92 | MC |
| SRR1013787 | panicle | PA64s_PA | 2.09 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 3.61 | MC |
| SRR504363 | leaf | 93-11 X NPB | 2.62 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.69 | MC |
| SRR1013789 | panicle | 93-11_PA | 1.08 | MC |
| SRR1013788 | panicle | LYP9_PA | 1.48 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 7.94 | MC |
| SRR447135 | shoot | As(III) 20 uM | 8.52 | MC |
| SRR447134 | shoot | As(III) 80 uM | 14.56 | MC |
| SRR447133 | shoot | As(III) 20 uM | 3.94 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 0.69 | MC |
| SRR447131 | root | As(III) 80 uM | 0.67 | MC |
| SRR447130 | root | As(III) 20 uM | 1.56 | MC |
| SRR1849765 | leaf | Control 30min | 6.76 | MC |
| SRR1849767 | leaf | Control 30min | 5.44 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1.91 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 9.05 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1.19 | MC |
| SRR6498701 | leaf | "WT, Control" | 3.88 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 2.70 | MC |
| SRR3203907 | leaf | WT | 6.41 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 2.06 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 5.71 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 7.17 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 0.80 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 0.93 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 0.80 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.69 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 4.82 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1.39 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 3.17 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 6.49 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 2.29 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 5.66 | MC |
| SRR3130370 | leaf | control 8 hour | 8.11 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 4.76 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 2.16 | MC |
| SRR7058096 | leaf | rice_mock | 5.27 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.15 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.19 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 5.61 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 0.93 | MC |
| SRR6365689 | seedling | Wild type | 0.28 | MC |
| SRR447136 | shoot | As(III) 80 uM | 1.06 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 0.69 | MC |
| SRR10704060 | leaf | Glyphosate | 26.63 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 0.67 | MC |
| SRR2154075 | seed | Taipei309_seed | 0.56 | MC |
| SRR3140952 | leaf | "45C, 0h" | 1.35 | MC |
| SRR4098208 | root | No treatment | 1.88 | MC |
| SRR3130369 | leaf | control 8 hour | 5.40 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 3.51 | MC |
| SRR4098205 | seedling | Heat (50C) | 5.01 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 1.99 | MC |
| SRR3130365 | leaf | control 0 hour | 3.84 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 3.55 | MC |
| SRR3130366 | leaf | control 0 hour | 6.11 | MC |
| SRR2862364 | leaf | mock leaf cells | 3.29 | MC |
| SRR2862365 | leaf | mock leaf cells | 1.80 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 1.60 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 9.39 | MC |
| SRR4098207 | panicle | No treatment | 6.32 | MC |
| SRR10704055 | leaf | CK | 11.59 | MC |
| SRR10704056 | leaf | CK | 9.96 | MC |
| SRR10704059 | leaf | Glyphosate | 9.82 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 1.40 | MC |
| SRR6498699 | leaf | "WT, Control" | 1.99 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 4.70 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 4.36 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 19.60 | MC |
| SRR10690144 | leaf | IR24_0h | 6.30 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 8.50 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 19.24 | MC |
| SRR10690143 | leaf | IR24_0h | 9.59 | MC |
| SRR10690142 | leaf | IR24_0h | 8.50 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 15.69 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 22.04 | MC |
| SRR2646854 | panicle | SP | 0.28 | MC |
| SRR4098203 | seedling | No treatment | 7.61 | MC |
| SRR6810101 | seedling | seedling | 2.33 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 3.25 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 3.08 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 6.98 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 3.17 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.74 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1.07 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 17.66 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 5.42 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.48 | MC |
| SRR10690153 | leaf | IRBB5_0h | 1.04 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.87 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.41 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 0.58 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 11.77 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 3.13 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1.36 | MC |
| SRR3110556 | shoot | shoot control | 15.72 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 3.40 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 8.95 | MC |
| SRR1061616 | panicle | Normal | 0.40 | MC |
| SRR1061614 | panicle | Normal | 0.32 | MC |
| SRR1061612 | panicle | Normal | 0.20 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 13.48 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 1.60 | MC |
| SRR1061618 | flag_leaf | Normal | 1.13 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 2.00 | MC |
| SRR9937395 | spikelet | sRNA basal spikelets | 3.35 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 1.23 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 0.40 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 3.66 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 1.99 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 3.20 | MC |
| SRR3140954 | leaf | "45C, 12h" | 7.20 | MC |
| SRR089621 | panicle | cold | 8.63 | MC |
| SRR3140957 | leaf | "45C, 24h" | 8.88 | MC |
| SRR504360 | leaf | Nipponbare | 2.05 | MC |
| SRR504361 | leaf | Nov-93 | 1.32 | MC |
| SRR4098172 | seedling | Cold (4C) | 9.07 | MC |
| SRR3140956 | leaf | "45C, 24h" | 4.21 | MC |
| SRR3140953 | leaf | "45C, 0h" | 3.55 | MC |
| SRR6810102 | seedling | seedling | 2.19 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 2.26 | MC |
| SRR10956502 | panicle | WT | 0.40 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 2.28 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 6.70 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 1.18 | MC |
| SRR8258048 | leaf_sheath | R_bph | 7.77 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 1.62 | MC |
| SRR1740024 | seedling | N22-Control | 0.43 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 1.07 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 0.64 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 9.02 | MC |
| SRR1654490 | leaf | wild type | 10.18 | MC |
| SRR3110557 | shoot | shoot treated | 24.97 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.58 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.48 | MC |
| SRR8258051 | leaf_sheath | R_bph | 6.91 | MC |
| SRR504362 | leaf | NPB X 93-11 | 2.92 | MC |