| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 17.40 | HC |
| SRR2154075 | seed | Taipei309_seed | 227.05 | HC |
| SRR3140952 | leaf | "45C, 0h" | 110.41 | HC |
| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 51.97 | HC |
| SRR3140955 | leaf | "45C, 12h" | 42.70 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 62.29 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 21.79 | HC |
| SRR8258050 | leaf_sheath | R_bph | 43.41 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 36.88 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 31.82 | HC |
| SRR10690152 | leaf | IRBB5_0h | 9091.23 | HC |
| SRR7058097 | leaf | rice_mock | 305.12 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 17.62 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 31.01 | HC |
| SRR7058098 | leaf | rice_RSV | 528.68 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1103.37 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 277.38 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 642.27 | HC |
| SRR2154077 | seedling | KDM105_seedling | 799.15 | HC |
| SRR2154074 | seed | Nipponbare_seed | 170.80 | HC |
| SRR10690151 | leaf | IRBB5_0h | 12105.73 | HC |
| SRR2154072 | seed | Rathuwee_seed | 48.60 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 29.35 | HC |
| SRR2154070 | seed | Guangluai4_seed | 7.45 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 4211.72 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1962.70 | HC |
| SRR1061625 | panicle | Heat Stress | 16.20 | HC |
| SRR1061624 | panicle | Normal | 71.84 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 184.66 | HC |
| SRR1061622 | flag_leaf | Normal | 149.64 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 162.61 | HC |
| SRR1061620 | flag_leaf | Normal | 156.61 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2300.89 | HC |
| SRR10704058 | leaf | Glyphosate | 728.07 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1023.71 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 80.57 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 16951.86 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 11185.85 | HC |
| SRR1013787 | panicle | PA64s_PA | 6679.49 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 19783.99 | HC |
| SRR504363 | leaf | 93-11 X NPB | 623.59 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 304.07 | HC |
| SRR1013789 | panicle | 93-11_PA | 3326.94 | HC |
| SRR1013788 | panicle | LYP9_PA | 6076.93 | HC |
| SRR9070101 | shoot_base | WT_base | 6.83 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 573.35 | HC |
| SRR089619 | panicle | control | 43.32 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 132.06 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 2187.79 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 76.53 | HC |
| SRR3203907 | leaf | WT | 43646.47 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 47.65 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 48.08 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 27.52 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 75.33 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 17.78 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 57.59 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 59.95 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 41.19 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 64.30 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 76.52 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 2815.51 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 15.59 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 1486.70 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 383.76 | HC |
| SRR3130370 | leaf | control 8 hour | 684.71 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 294.55 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 295.07 | HC |
| SRR7058096 | leaf | rice_mock | 709.98 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 1032.12 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 58.03 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 244.56 | HC |
| SRR10704060 | leaf | Glyphosate | 550.41 | HC |
| SRR976171 | lamina_joint | wild type | 2011.46 | HC |
| SRR4098208 | root | No treatment | 809.44 | HC |
| SRR089774 | panicle | wild-type | 22.87 | HC |
| SRR089772 | panicle | wild-type | 37.99 | HC |
| SRR4098209 | leaf | No treatment | 1446.56 | HC |
| SRR3130369 | leaf | control 8 hour | 509.79 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 744.77 | HC |
| SRR9070100 | shoot_base | WT_base | 5.52 | HC |
| SRR4098205 | seedling | Heat (50C) | 1516.99 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 69.24 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 26.43 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 33.46 | HC |
| SRR3130365 | leaf | control 0 hour | 79.98 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 805.93 | HC |
| SRR3130366 | leaf | control 0 hour | 546.45 | HC |
| SRR2862364 | leaf | mock leaf cells | 489.71 | HC |
| SRR2862365 | leaf | mock leaf cells | 246.92 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 13837.64 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 3627.64 | HC |
| SRR2862363 | leaf | mock leaf cells | 11510.05 | HC |
| SRR8649147 | panicle | panicle tissue | 7.94 | HC |
| SRR4098207 | panicle | No treatment | 1328.96 | HC |
| SRR10704055 | leaf | CK | 71.81 | HC |
| SRR10704057 | leaf | CK | 142.17 | HC |
| SRR10704056 | leaf | CK | 65.16 | HC |
| SRR10704059 | leaf | Glyphosate | 174.16 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 151.90 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 24.03 | HC |
| SRR9070102 | shoot_base | WT_base | 6.52 | HC |
| SRR6498699 | leaf | "WT, Control" | 30.29 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 402.88 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 1318.01 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 2045.38 | HC |
| SRR10690144 | leaf | IR24_0h | 4576.48 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1653.34 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 3693.13 | HC |
| SRR10690143 | leaf | IR24_0h | 8181.26 | HC |
| SRR10690142 | leaf | IR24_0h | 8535.99 | HC |
| SRR2646852 | panicle | FP | 13.85 | HC |
| SRR2646853 | panicle | FP | 24.28 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 30.88 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1631.45 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1282.06 | HC |
| SRR2646854 | panicle | SP | 53.95 | HC |
| SRR2646855 | panicle | SP | 55.99 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 62.25 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 188.52 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 54.58 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 10.17 | HC |
| SRR4098203 | seedling | No treatment | 26639.87 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 56.65 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 30.98 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 160.73 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 85.24 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 145.22 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 84.43 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 19.96 | HC |
| SRR6810101 | seedling | seedling | 111.06 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 33.73 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 30.63 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 78.74 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 14.91 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 47.49 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 96.99 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 15.86 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 26.23 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2210.25 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2249.71 | HC |
| SRR1849784 | root | Control 120min | 54.39 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 28.35 | HC |
| SRR10690153 | leaf | IRBB5_0h | 6150.24 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 12.17 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 62.49 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 32.37 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1576.06 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 50.00 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 49.46 | HC |
| SRR3110556 | shoot | shoot control | 180.89 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 2998.06 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 3401.70 | HC |
| SRR1061616 | panicle | Normal | 8.76 | HC |
| SRR1061617 | panicle | Heat Stress | 20.78 | HC |
| SRR1061614 | panicle | Normal | 30.98 | HC |
| SRR1061615 | panicle | Heat Stress | 32.14 | HC |
| SRR1061612 | panicle | Normal | 71.95 | HC |
| SRR1061613 | panicle | Heat Stress | 160.19 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 37.06 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 17505.73 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 60.44 | HC |
| SRR1061618 | flag_leaf | Normal | 374.67 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 997.64 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 823.64 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 309.05 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 16.63 | HC |
| SRR3140954 | leaf | "45C, 12h" | 60.39 | HC |
| SRR089621 | panicle | cold | 39.13 | HC |
| SRR089620 | panicle | drought | 31.39 | HC |
| SRR3140957 | leaf | "45C, 24h" | 32.61 | HC |
| SRR089622 | panicle | salt | 18.40 | HC |
| SRR504360 | leaf | Nipponbare | 262.61 | HC |
| SRR504361 | leaf | Nov-93 | 585.69 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 9.31 | HC |
| SRR4098172 | seedling | Cold (4C) | 3613.80 | HC |
| SRR3140956 | leaf | "45C, 24h" | 62.33 | HC |
| SRR3140953 | leaf | "45C, 0h" | 156.35 | HC |
| SRR6810102 | seedling | seedling | 129.68 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 33.24 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 1171.73 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 39.75 | HC |
| SRR1740023 | seedling | IR64-Control | 12.34 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 1113.49 | HC |
| SRR1740025 | seedling | PK-Control | 13.54 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 13.32 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 38.43 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 45.38 | HC |
| SRR1654490 | leaf | wild type | 5342.94 | HC |
| SRR3110557 | shoot | shoot treated | 152.01 | HC |
| SRR5940086 | panicle | Wild type | 32.30 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 703.23 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 983.15 | HC |
| SRR504362 | leaf | NPB X 93-11 | 347.24 | HC |