| SRR8258058 | leaf_sheath | R_bph_late | 28.95 | HC |
| SRR10690152 | leaf | IRBB5_0h | 6974.06 | HC |
| SRR6810106 | panicle | panicle | 13.36 | HC |
| SRR7058097 | leaf | rice_mock | 177.12 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 8.05 | HC |
| SRR7058098 | leaf | rice_RSV | 221.57 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 4389.30 | HC |
| SRR10690151 | leaf | IRBB5_0h | 4566.94 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 64.15 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 7311.72 | HC |
| SRR1061625 | panicle | Heat Stress | 110.36 | HC |
| SRR1061624 | panicle | Normal | 459.53 | HC |
| SRR1061622 | flag_leaf | Normal | 1160.56 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 1268.13 | HC |
| SRR1061620 | flag_leaf | Normal | 1365.82 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5348.33 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5545.18 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 18.15 | HC |
| SRR6810105 | panicle | panicle | 15.61 | HC |
| SRR1849765 | leaf | Control 30min | 55.42 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 30.27 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 232.98 | HC |
| SRR6498701 | leaf | "WT, Control" | 92.99 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 108.02 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 406.23 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 96.03 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 58.89 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 130.09 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 9.99 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 17.74 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 13.82 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 10.42 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 9.83 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 40.13 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 46.44 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 53.85 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 18.32 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 8.83 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 7.10 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 59.09 | HC |
| SRR1849771 | leaf | Control 120min | 44.47 | HC |
| SRR7058096 | leaf | rice_mock | 295.78 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 6.34 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 17.95 | HC |
| SRR976171 | lamina_joint | wild type | 390.80 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 17.74 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 15.11 | HC |
| SRR4098205 | seedling | Heat (50C) | 580.88 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 1000.10 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 24.92 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 40.33 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 59.85 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 3.96 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 4.41 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 3.31 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 16.59 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 9.84 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 11.46 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 86.97 | HC |
| SRR8649147 | panicle | panicle tissue | 28.85 | HC |
| SRR4098207 | panicle | No treatment | 27.54 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 1733.83 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 89.98 | HC |
| SRR6498699 | leaf | "WT, Control" | 164.68 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 23.23 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 4245.92 | HC |
| SRR10690144 | leaf | IR24_0h | 8717.47 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 7369.14 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 3487.44 | HC |
| SRR10690143 | leaf | IR24_0h | 11673.03 | HC |
| SRR10690142 | leaf | IR24_0h | 9620.49 | HC |
| SRR2646852 | panicle | FP | 11.63 | HC |
| SRR2646853 | panicle | FP | 18.60 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 120.95 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 26.51 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 3479.17 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 3915.16 | HC |
| SRR2646854 | panicle | SP | 67.54 | HC |
| SRR2646855 | panicle | SP | 67.17 | HC |
| SRR4098203 | seedling | No treatment | 83.94 | HC |
| SRR6365693 | panicle | Wild type | 17.67 | HC |
| SRR6365694 | panicle | Wild type | 12.77 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 20.10 | HC |
| SRR6810101 | seedling | seedling | 1367.01 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 22.78 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 26.33 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 3107.99 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 3979.99 | HC |
| SRR1849784 | root | Control 120min | 35.04 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 8.27 | HC |
| SRR10690153 | leaf | IRBB5_0h | 15963.07 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 3441.51 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 37.19 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 16.89 | HC |
| SRR3110556 | shoot | shoot control | 72.35 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 180.37 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 26.34 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 225.01 | HC |
| SRR1061616 | panicle | Normal | 20.67 | HC |
| SRR1061617 | panicle | Heat Stress | 102.39 | HC |
| SRR1061614 | panicle | Normal | 52.71 | HC |
| SRR1061615 | panicle | Heat Stress | 174.96 | HC |
| SRR1061612 | panicle | Normal | 315.48 | HC |
| SRR1061613 | panicle | Heat Stress | 633.63 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 230.23 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 924.33 | HC |
| SRR1061618 | flag_leaf | Normal | 9531.29 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 12108.25 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 35.57 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 34.91 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 45.47 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 42.21 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 11.07 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 30.51 | HC |
| SRR2544786 | embryo | dry seed | 19.17 | HC |
| SRR4098172 | seedling | Cold (4C) | 205.97 | HC |
| SRR6810102 | seedling | seedling | 1580.52 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 9.84 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 35.63 | HC |
| SRR3110557 | shoot | shoot treated | 108.04 | HC |
| SRR5940086 | panicle | Wild type | 11.07 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 75.65 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 51.77 | HC |