| SRR1013788 | panicle | LYP9_PA | 2.88 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 3.41 | MC |
| SRR7058097 | leaf | rice_mock | 12.49 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.68 | MC |
| SRR7058098 | leaf | rice_RSV | 19.12 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 23.59 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 1.50 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 4.30 | MC |
| SRR2154077 | seedling | KDM105_seedling | 3.42 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 11.67 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 16.06 | MC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 3.74 | MC |
| SRR1013785 | flag_leaf | LYP9_FL | 2.80 | MC |
| SRR1013784 | flag_leaf | PA64s_FL | 1.17 | MC |
| SRR1013787 | panicle | PA64s_PA | 4.18 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 3.18 | MC |
| SRR504363 | leaf | 93-11 X NPB | 5.01 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.80 | MC |
| SRR1013789 | panicle | 93-11_PA | 4.20 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 1.54 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 17.05 | MC |
| SRR447130 | root | As(III) 20 uM | 5.38 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 1.65 | MC |
| SRR3203907 | leaf | WT | 8.31 | MC |
| SRR447129 | root | As(III) 80 uM | 4.08 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 8.80 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 9.20 | MC |
| SRR3130370 | leaf | control 8 hour | 9.20 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 14.48 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 9.01 | MC |
| SRR7058096 | leaf | rice_mock | 13.63 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 4.72 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 4.78 | MC |
| SRR6365689 | seedling | Wild type | 11.37 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 3.31 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 2.18 | MC |
| SRR3130369 | leaf | control 8 hour | 10.78 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 8.84 | MC |
| SRR9070100 | shoot_base | WT_base | 2.37 | MC |
| SRR3130365 | leaf | control 0 hour | 15.87 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 9.73 | MC |
| SRR3130366 | leaf | control 0 hour | 10.18 | MC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 2.91 | MC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 1.92 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 3.46 | MC |
| SRR2862364 | leaf | mock leaf cells | 8.70 | MC |
| SRR2862365 | leaf | mock leaf cells | 10.94 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 27.85 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 9.92 | MC |
| SRR2862363 | leaf | mock leaf cells | 23.89 | MC |
| SRR9070102 | shoot_base | WT_base | 2.46 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 7.56 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 4.70 | MC |
| SRR10690144 | leaf | IR24_0h | 1.07 | MC |
| SRR10690142 | leaf | IR24_0h | 17.59 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 2.11 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 2.00 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 2.79 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 2.59 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 1.87 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 2.20 | MC |
| SRR6365690 | seedling | Wild type | 13.73 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 1.52 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 0.78 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.46 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 2.07 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 1.77 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 22.74 | MC |
| SRR1849784 | root | Control 120min | 12.56 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 0.46 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 21.50 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 5.06 | MC |
| SRR504360 | leaf | Nipponbare | 8.44 | MC |
| SRR504361 | leaf | Nov-93 | 4.94 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 1.99 | MC |
| SRR2544786 | embryo | dry seed | 1.13 | MC |
| SRR4098172 | seedling | Cold (4C) | 11.57 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 12.94 | MC |
| SRR1740023 | seedling | IR64-Control | 11.80 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 2.45 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 2.11 | MC |
| SRR1654490 | leaf | wild type | 13.18 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 1.07 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1.56 | MC |
| SRR504362 | leaf | NPB X 93-11 | 9.64 | MC |