| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 46.95 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 93.91 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 37.49 | HC |
| SRR8258050 | leaf_sheath | R_bph | 43.43 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 82.65 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 89.27 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 102.59 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 137.32 | HC |
| SRR6810106 | panicle | panicle | 370.60 | HC |
| SRR7058097 | leaf | rice_mock | 44.04 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 59.32 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 37.98 | HC |
| SRR2154070 | seed | Guangluai4_seed | 8.18 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 56.52 | HC |
| SRR1061625 | panicle | Heat Stress | 363.48 | HC |
| SRR1061624 | panicle | Normal | 680.13 | HC |
| SRR1061622 | flag_leaf | Normal | 43.69 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 16.62 | HC |
| SRR447128 | root | As(III) 20 uM | 216.82 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6346.05 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 82.98 | HC |
| SRR9070101 | shoot_base | WT_base | 390.09 | HC |
| SRR6810105 | panicle | panicle | 378.36 | HC |
| SRR089619 | panicle | control | 192.82 | HC |
| SRR447134 | shoot | As(III) 80 uM | 43.27 | HC |
| SRR447133 | shoot | As(III) 20 uM | 29.28 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 189.45 | HC |
| SRR447131 | root | As(III) 80 uM | 117.04 | HC |
| SRR447130 | root | As(III) 20 uM | 412.81 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 15.08 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 37.64 | HC |
| SRR6498701 | leaf | "WT, Control" | 47.27 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 100.38 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 877.73 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 49.63 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 6.50 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 9.17 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 695.88 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 8167.44 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 10794.85 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 10108.83 | HC |
| SRR447129 | root | As(III) 80 uM | 469.27 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 11.76 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 26.24 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 1721.13 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2399.80 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 98.01 | HC |
| SRR6365689 | seedling | Wild type | 22.16 | HC |
| SRR447136 | shoot | As(III) 80 uM | 43.28 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6297.29 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 136.18 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 806.78 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 109.90 | HC |
| SRR3140952 | leaf | "45C, 0h" | 12.03 | HC |
| SRR4098208 | root | No treatment | 82.86 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3064.99 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 11531.76 | HC |
| SRR9070100 | shoot_base | WT_base | 356.09 | HC |
| SRR4098205 | seedling | Heat (50C) | 64.88 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 55.25 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2395.86 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 8748.11 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 5500.56 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2124.98 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2026.88 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 37.66 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 37.56 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 24.29 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 5.14 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 7.30 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 6.00 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 12.42 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 135.40 | HC |
| SRR8649147 | panicle | panicle tissue | 1608.12 | HC |
| SRR4098207 | panicle | No treatment | 60.47 | HC |
| SRR10704057 | leaf | CK | 34.09 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 13.51 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1894.98 | HC |
| SRR9070102 | shoot_base | WT_base | 272.52 | HC |
| SRR6498699 | leaf | "WT, Control" | 61.87 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 6642.93 | HC |
| SRR2646852 | panicle | FP | 1240.51 | HC |
| SRR2646853 | panicle | FP | 1115.96 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1146.37 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3958.68 | HC |
| SRR2646854 | panicle | SP | 1338.41 | HC |
| SRR2646855 | panicle | SP | 942.74 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 1110.72 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 39.32 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 23.66 | HC |
| SRR4098203 | seedling | No treatment | 149.46 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 26.20 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 44.37 | HC |
| SRR6365692 | panicle | Wild type | 387.09 | HC |
| SRR6365693 | panicle | Wild type | 298.46 | HC |
| SRR6365694 | panicle | Wild type | 297.67 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 904.21 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 192.28 | HC |
| SRR6810101 | seedling | seedling | 80.76 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 37.61 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 285.78 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 87.03 | HC |
| SRR1849784 | root | Control 120min | 47.07 | HC |
| SRR6365691 | panicle | Wild type | 435.32 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 163.62 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 26.70 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 39.99 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 10.51 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 9.23 | HC |
| SRR3110556 | shoot | shoot control | 47.31 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 132.43 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2381.28 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 271.04 | HC |
| SRR1061616 | panicle | Normal | 477.84 | HC |
| SRR1061617 | panicle | Heat Stress | 1289.29 | HC |
| SRR1061614 | panicle | Normal | 997.99 | HC |
| SRR1061615 | panicle | Heat Stress | 1381.56 | HC |
| SRR1061612 | panicle | Normal | 816.23 | HC |
| SRR1061613 | panicle | Heat Stress | 849.08 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 360.00 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 9162.56 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 137.09 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 54.08 | HC |
| SRR1061618 | flag_leaf | Normal | 22.42 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 76.60 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 69.99 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 8750.65 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 732.67 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 26.67 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 29.53 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 4445.36 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 9655.82 | HC |
| SRR089621 | panicle | cold | 259.90 | HC |
| SRR089620 | panicle | drought | 224.37 | HC |
| SRR089622 | panicle | salt | 259.00 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 4410.13 | HC |
| SRR2544786 | embryo | dry seed | 2810.56 | HC |
| SRR4098172 | seedling | Cold (4C) | 58.01 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 5373.25 | HC |
| SRR6810102 | seedling | seedling | 88.76 | HC |
| SRR10956502 | panicle | WT | 368.12 | HC |
| SRR10956501 | panicle | WT | 395.69 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 290.74 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 8.62 | HC |
| SRR1740023 | seedling | IR64-Control | 1286.86 | HC |
| SRR1740025 | seedling | PK-Control | 457.87 | HC |
| SRR1740024 | seedling | N22-Control | 512.65 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 88.31 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 101.01 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 9578.68 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3111.13 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 224.74 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 954.81 | HC |
| SRR3110557 | shoot | shoot treated | 79.80 | HC |
| SRR5940086 | panicle | Wild type | 368.43 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 300.22 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1642.41 | HC |
| SRR8258051 | leaf_sheath | R_bph | 46.28 | HC |