| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 45.62 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 94.23 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 36.29 | HC |
| SRR8258050 | leaf_sheath | R_bph | 42.34 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 34.33 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 86.81 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 96.09 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 131.71 | HC |
| SRR6810106 | panicle | panicle | 172.58 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 57.34 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 36.87 | HC |
| SRR2154070 | seed | Guangluai4_seed | 7.94 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 57.23 | HC |
| SRR1061625 | panicle | Heat Stress | 197.21 | HC |
| SRR1061624 | panicle | Normal | 355.60 | HC |
| SRR1061622 | flag_leaf | Normal | 24.52 | HC |
| SRR447128 | root | As(III) 20 uM | 201.90 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 5999.55 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 81.81 | HC |
| SRR9070101 | shoot_base | WT_base | 376.37 | HC |
| SRR6810105 | panicle | panicle | 184.85 | HC |
| SRR089619 | panicle | control | 168.13 | HC |
| SRR447134 | shoot | As(III) 80 uM | 35.49 | HC |
| SRR447133 | shoot | As(III) 20 uM | 24.63 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 166.40 | HC |
| SRR447131 | root | As(III) 80 uM | 115.39 | HC |
| SRR447130 | root | As(III) 20 uM | 395.09 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 87.05 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 872.75 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 8.34 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 718.96 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 7809.38 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 10243.31 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 9582.59 | HC |
| SRR447129 | root | As(III) 80 uM | 448.67 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 9.16 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 17.93 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 1696.32 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2292.75 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 47.85 | HC |
| SRR447136 | shoot | As(III) 80 uM | 37.47 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 5983.54 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 54.78 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 800.16 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 53.19 | HC |
| SRR4098208 | root | No treatment | 73.36 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2969.44 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 11075.08 | HC |
| SRR9070100 | shoot_base | WT_base | 339.66 | HC |
| SRR4098205 | seedling | Heat (50C) | 63.29 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 27.63 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2252.52 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 8328.32 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 5133.46 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1962.30 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1945.79 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 21.92 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 23.48 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 17.29 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 3.68 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 4.82 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 4.48 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 8.96 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 136.42 | HC |
| SRR8649147 | panicle | panicle tissue | 1347.80 | HC |
| SRR4098207 | panicle | No treatment | 57.63 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 8.80 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1813.21 | HC |
| SRR9070102 | shoot_base | WT_base | 258.95 | HC |
| SRR6498699 | leaf | "WT, Control" | 32.58 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 6154.83 | HC |
| SRR2646852 | panicle | FP | 931.21 | HC |
| SRR2646853 | panicle | FP | 899.28 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1015.29 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3660.30 | HC |
| SRR2646854 | panicle | SP | 1123.99 | HC |
| SRR2646855 | panicle | SP | 839.69 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 1096.16 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 38.44 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 18.82 | HC |
| SRR4098203 | seedling | No treatment | 141.72 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 25.38 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 43.15 | HC |
| SRR6365692 | panicle | Wild type | 258.20 | HC |
| SRR6365693 | panicle | Wild type | 145.10 | HC |
| SRR6365694 | panicle | Wild type | 135.30 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 894.28 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 178.93 | HC |
| SRR6810101 | seedling | seedling | 35.57 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 15.68 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 278.58 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 84.58 | HC |
| SRR1849784 | root | Control 120min | 37.66 | HC |
| SRR6365691 | panicle | Wild type | 297.62 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 154.58 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 25.13 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 39.31 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 9.88 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 7.47 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 122.99 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2297.62 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 258.02 | HC |
| SRR1061616 | panicle | Normal | 223.46 | HC |
| SRR1061617 | panicle | Heat Stress | 909.88 | HC |
| SRR1061614 | panicle | Normal | 352.90 | HC |
| SRR1061615 | panicle | Heat Stress | 1011.78 | HC |
| SRR1061612 | panicle | Normal | 375.98 | HC |
| SRR1061613 | panicle | Heat Stress | 576.96 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 337.44 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 8591.25 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 134.34 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 30.22 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 68.94 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 63.65 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 8429.96 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 691.27 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 26.15 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 29.30 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 4241.39 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 9258.52 | HC |
| SRR089621 | panicle | cold | 237.22 | HC |
| SRR089620 | panicle | drought | 213.44 | HC |
| SRR089622 | panicle | salt | 227.02 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 4153.33 | HC |
| SRR2544786 | embryo | dry seed | 2714.86 | HC |
| SRR4098172 | seedling | Cold (4C) | 58.95 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 5016.51 | HC |
| SRR6810102 | seedling | seedling | 36.83 | HC |
| SRR10956502 | panicle | WT | 260.42 | HC |
| SRR10956501 | panicle | WT | 269.88 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 284.04 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 8.14 | HC |
| SRR1740023 | seedling | IR64-Control | 582.90 | HC |
| SRR1740025 | seedling | PK-Control | 261.90 | HC |
| SRR1740024 | seedling | N22-Control | 269.69 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 43.19 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 45.41 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 8924.51 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2762.28 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 218.63 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 930.87 | HC |
| SRR3110557 | shoot | shoot treated | 60.39 | HC |
| SRR5940086 | panicle | Wild type | 267.76 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 300.07 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1608.96 | HC |