| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 0.30 | MC |
| SRR8258050 | leaf_sheath | R_bph | 0.95 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 0.99 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 0.52 | MC |
| SRR10690152 | leaf | IRBB5_0h | 0.63 | MC |
| SRR7058097 | leaf | rice_mock | 7.33 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1.36 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.14 | MC |
| SRR7058098 | leaf | rice_RSV | 5.97 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.54 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 3.89 | MC |
| SRR2154077 | seedling | KDM105_seedling | 1.59 | MC |
| SRR2154074 | seed | Nipponbare_seed | 1.66 | MC |
| SRR10690151 | leaf | IRBB5_0h | 0.66 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 1.62 | MC |
| SRR2154070 | seed | Guangluai4_seed | 1.23 | MC |
| SRR2154071 | seed | KDM105_seed | 2.79 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.58 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.10 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 3.78 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.82 | MC |
| SRR10704058 | leaf | Glyphosate | 0.59 | MC |
| SRR447128 | root | As(III) 20 uM | 0.69 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.51 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6.67 | MC |
| SRR1013787 | panicle | PA64s_PA | 1.39 | MC |
| SRR504363 | leaf | 93-11 X NPB | 1.67 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 1.53 | MC |
| SRR1013789 | panicle | 93-11_PA | 2.59 | MC |
| SRR1013788 | panicle | LYP9_PA | 1.66 | MC |
| SRR9070101 | shoot_base | WT_base | 1.28 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 2.54 | MC |
| SRR6810105 | panicle | panicle | 5.08 | MC |
| SRR089619 | panicle | control | 0.44 | MC |
| SRR447135 | shoot | As(III) 20 uM | 0.72 | MC |
| SRR447134 | shoot | As(III) 80 uM | 2.20 | MC |
| SRR447133 | shoot | As(III) 20 uM | 2.09 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 1.38 | MC |
| SRR447131 | root | As(III) 80 uM | 0.50 | MC |
| SRR447130 | root | As(III) 20 uM | 0.87 | MC |
| SRR1849765 | leaf | Control 30min | 14.42 | MC |
| SRR1849767 | leaf | Control 30min | 8.61 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1.27 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 7.24 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 0.51 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 18.71 | MC |
| SRR6498701 | leaf | "WT, Control" | 20.92 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 22.71 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 1.95 | MC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 1.66 | MC |
| SRR3203907 | leaf | WT | 2.97 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 11.93 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 0.33 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 0.29 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 0.49 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 0.14 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.33 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.30 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 0.30 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 1.21 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 10.12 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.09 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5.47 | MC |
| SRR447129 | root | As(III) 80 uM | 0.24 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 3.05 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 8.80 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 12.78 | MC |
| SRR1849773 | leaf | Control 120min | 13.72 | MC |
| SRR1849772 | leaf | Control 120min | 12.21 | MC |
| SRR1849771 | leaf | Control 120min | 9.88 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 5.28 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 4.18 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 2.65 | MC |
| SRR3130370 | leaf | control 8 hour | 5.75 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 6.57 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 1.29 | MC |
| SRR7058096 | leaf | rice_mock | 6.79 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.53 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 2.08 | MC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 1.92 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 6.16 | MC |
| SRR6365689 | seedling | Wild type | 5.82 | MC |
| SRR447136 | shoot | As(III) 80 uM | 2.64 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 4.95 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 1.73 | MC |
| SRR2154075 | seed | Taipei309_seed | 2.07 | MC |
| SRR976171 | lamina_joint | wild type | 0.60 | MC |
| SRR4098208 | root | No treatment | 0.99 | MC |
| SRR4098209 | leaf | No treatment | 0.66 | MC |
| SRR3130369 | leaf | control 8 hour | 6.32 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 5.84 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4.32 | MC |
| SRR9070100 | shoot_base | WT_base | 1.53 | MC |
| SRR4098205 | seedling | Heat (50C) | 0.36 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 9.31 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 5.81 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 4.42 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 6.86 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 7.87 | MC |
| SRR3130365 | leaf | control 0 hour | 7.81 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3.98 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 4.31 | MC |
| SRR3130366 | leaf | control 0 hour | 5.46 | MC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 0.40 | MC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 0.28 | MC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 0.23 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 0.12 | MC |
| SRR1742990 | endosperm | 4X_En_sRNA | 1.63 | MC |
| SRR2862365 | leaf | mock leaf cells | 0.49 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 3.65 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 1.12 | MC |
| SRR2862363 | leaf | mock leaf cells | 2.43 | MC |
| SRR10704055 | leaf | CK | 0.97 | MC |
| SRR10704057 | leaf | CK | 3.05 | MC |
| SRR10704056 | leaf | CK | 1.74 | MC |
| SRR10704059 | leaf | Glyphosate | 1.16 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 4.01 | MC |
| SRR9070102 | shoot_base | WT_base | 1.50 | MC |
| SRR6498699 | leaf | "WT, Control" | 16.36 | MC |
| SRR2154079 | seedling | Heukgyeong_seedling | 1.38 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 4.64 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.02 | MC |
| SRR10690144 | leaf | IR24_0h | 0.50 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.41 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.41 | MC |
| SRR10690143 | leaf | IR24_0h | 0.87 | MC |
| SRR10690142 | leaf | IR24_0h | 0.93 | MC |
| SRR2646853 | panicle | FP | 9.39 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 5.43 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 7.82 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.79 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 0.64 | MC |
| SRR2646854 | panicle | SP | 8.24 | MC |
| SRR2646855 | panicle | SP | 6.43 | MC |
| SRR5049785 | anther | floret length/mm: >7.0 | 0.76 | MC |
| SRR4098203 | seedling | No treatment | 0.61 | MC |
| SRR6365690 | seedling | Wild type | 4.58 | MC |
| SRR6365692 | panicle | Wild type | 8.57 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 0.89 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 1.30 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 3.04 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.67 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.44 | MC |
| SRR1849784 | root | Control 120min | 1.57 | MC |
| SRR6365691 | panicle | Wild type | 8.28 | MC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 0.31 | MC |
| SRR10690153 | leaf | IRBB5_0h | 0.22 | MC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 0.46 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.36 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 0.29 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.35 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 0.24 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.91 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4.11 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 0.77 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.49 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 0.67 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 7.32 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 0.41 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 4.96 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 1.19 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 0.65 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 0.82 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 6.81 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 5.08 | MC |
| SRR3140957 | leaf | "45C, 24h" | 0.49 | MC |
| SRR504360 | leaf | Nipponbare | 1.29 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 4.99 | MC |
| SRR2544786 | embryo | dry seed | 4.12 | MC |
| SRR4098172 | seedling | Cold (4C) | 0.84 | MC |
| SRR3140956 | leaf | "45C, 24h" | 0.96 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 3.97 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 0.99 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 0.47 | MC |
| SRR1740023 | seedling | IR64-Control | 3.81 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 0.78 | MC |
| SRR1740025 | seedling | PK-Control | 1.54 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 4.59 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 6.81 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 0.85 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 0.91 | MC |
| SRR1654490 | leaf | wild type | 1.51 | MC |
| SRR3110557 | shoot | shoot treated | 1.01 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.70 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.56 | MC |
| SRR504362 | leaf | NPB X 93-11 | 2.04 | MC |