| SRR5120079 | leaf_sheath | PC_0 | 0.58 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 1.41 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 0.52 | MC |
| SRR6810106 | panicle | panicle | 0.65 | MC |
| SRR7058097 | leaf | rice_mock | 0.75 | MC |
| SRR7058098 | leaf | rice_RSV | 1.38 | MC |
| SRR2154072 | seed | Rathuwee_seed | 0.18 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1.63 | MC |
| SRR1061622 | flag_leaf | Normal | 0.46 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 0.94 | MC |
| SRR1061620 | flag_leaf | Normal | 1.05 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.52 | MC |
| SRR504363 | leaf | 93-11 X NPB | 1.91 | MC |
| SRR089619 | panicle | control | 0.33 | MC |
| SRR1849765 | leaf | Control 30min | 8.11 | MC |
| SRR1849767 | leaf | Control 30min | 4.52 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1.92 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 7.84 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 8.80 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 15.88 | MC |
| SRR6498701 | leaf | "WT, Control" | 15.11 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 17.88 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 2.43 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 3.24 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 0.35 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 3.58 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 2.29 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 14.46 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 10.63 | MC |
| SRR1849773 | leaf | Control 120min | 5.49 | MC |
| SRR1849772 | leaf | Control 120min | 4.88 | MC |
| SRR1849771 | leaf | Control 120min | 6.40 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 6.86 | MC |
| SRR7058096 | leaf | rice_mock | 1.60 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 4.66 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 0.47 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.44 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 0.68 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 0.49 | MC |
| SRR3140952 | leaf | "45C, 0h" | 0.39 | MC |
| SRR976171 | lamina_joint | wild type | 8.91 | MC |
| SRR4098209 | leaf | No treatment | 1.30 | MC |
| SRR9070100 | shoot_base | WT_base | 0.24 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 1.66 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.27 | MC |
| SRR2862365 | leaf | mock leaf cells | 3.43 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 0.96 | MC |
| SRR8649147 | panicle | panicle tissue | 0.80 | MC |
| SRR4098207 | panicle | No treatment | 0.75 | MC |
| SRR10704055 | leaf | CK | 0.24 | MC |
| SRR10704057 | leaf | CK | 0.28 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 0.61 | MC |
| SRR6498699 | leaf | "WT, Control" | 11.08 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.23 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.66 | MC |
| SRR6365690 | seedling | Wild type | 0.35 | MC |
| SRR6365692 | panicle | Wild type | 0.82 | MC |
| SRR6365693 | panicle | Wild type | 0.33 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 12.98 | MC |
| SRR6810101 | seedling | seedling | 0.87 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 0.81 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.34 | MC |
| SRR10690153 | leaf | IRBB5_0h | 0.59 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 0.23 | MC |
| SRR3110556 | shoot | shoot control | 5.61 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.30 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 1.53 | MC |
| SRR1061614 | panicle | Normal | 0.48 | MC |
| SRR1061612 | panicle | Normal | 0.39 | MC |
| SRR1061613 | panicle | Heat Stress | 0.21 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.47 | MC |
| SRR1061618 | flag_leaf | Normal | 0.57 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 0.27 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 0.68 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 0.30 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.34 | MC |
| SRR089621 | panicle | cold | 2.80 | MC |
| SRR504360 | leaf | Nipponbare | 6.92 | MC |
| SRR3140953 | leaf | "45C, 0h" | 0.23 | MC |
| SRR10956502 | panicle | WT | 0.48 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 6.96 | MC |
| SRR10956501 | panicle | WT | 0.59 | MC |
| SRR1740023 | seedling | IR64-Control | 0.41 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 0.78 | MC |
| SRR1740025 | seedling | PK-Control | 0.58 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.40 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 1.59 | MC |
| SRR1654490 | leaf | wild type | 1.63 | MC |
| SRR3110557 | shoot | shoot treated | 6.81 | MC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 0.20 | MC |
| SRR504362 | leaf | NPB X 93-11 | 4.09 | MC |