| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 2.66 | MC |
| SRR3140955 | leaf | "45C, 12h" | 3.63 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 3.61 | MC |
| SRR8258050 | leaf_sheath | R_bph | 8.67 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 5.71 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 4.44 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 5.36 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 2.73 | MC |
| SRR10690152 | leaf | IRBB5_0h | 18.41 | MC |
| SRR6810106 | panicle | panicle | 0.86 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 13.22 | MC |
| SRR10690151 | leaf | IRBB5_0h | 18.67 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 3.00 | MC |
| SRR1061625 | panicle | Heat Stress | 1.78 | MC |
| SRR1061624 | panicle | Normal | 2.57 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 11.04 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.78 | MC |
| SRR1013787 | panicle | PA64s_PA | 2.79 | MC |
| SRR504363 | leaf | 93-11 X NPB | 32.42 | MC |
| SRR1013789 | panicle | 93-11_PA | 1.51 | MC |
| SRR1013788 | panicle | LYP9_PA | 1.67 | MC |
| SRR9070101 | shoot_base | WT_base | 0.26 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 20.86 | MC |
| SRR6810105 | panicle | panicle | 0.56 | MC |
| SRR089619 | panicle | control | 3.13 | MC |
| SRR447134 | shoot | As(III) 80 uM | 16.15 | MC |
| SRR447133 | shoot | As(III) 20 uM | 8.58 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 6.68 | MC |
| SRR447130 | root | As(III) 20 uM | 0.35 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 5.16 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 2.52 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 4.93 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 0.15 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 0.30 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 1.25 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.36 | MC |
| SRR447129 | root | As(III) 80 uM | 0.48 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.08 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.52 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 6.84 | MC |
| SRR6365689 | seedling | Wild type | 4.44 | MC |
| SRR447136 | shoot | As(III) 80 uM | 15.29 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 4.51 | MC |
| SRR10704060 | leaf | Glyphosate | 35.19 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 4.49 | MC |
| SRR2154075 | seed | Taipei309_seed | 0.38 | MC |
| SRR3140952 | leaf | "45C, 0h" | 6.78 | MC |
| SRR4098208 | root | No treatment | 0.27 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.68 | MC |
| SRR9070100 | shoot_base | WT_base | 0.55 | MC |
| SRR4098205 | seedling | Heat (50C) | 6.34 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.93 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.45 | MC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.14 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.80 | MC |
| SRR2862364 | leaf | mock leaf cells | 19.55 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 6.14 | MC |
| SRR8649147 | panicle | panicle tissue | 0.87 | MC |
| SRR4098207 | panicle | No treatment | 1.78 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.54 | MC |
| SRR9070102 | shoot_base | WT_base | 0.39 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 12.03 | MC |
| SRR10690144 | leaf | IR24_0h | 9.18 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 11.02 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 18.26 | MC |
| SRR10690143 | leaf | IR24_0h | 9.60 | MC |
| SRR10690142 | leaf | IR24_0h | 11.55 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.86 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 17.61 | MC |
| SRR4098203 | seedling | No treatment | 10.20 | MC |
| SRR6365690 | seedling | Wild type | 6.32 | MC |
| SRR6365692 | panicle | Wild type | 2.04 | MC |
| SRR6365693 | panicle | Wild type | 1.32 | MC |
| SRR6365694 | panicle | Wild type | 0.78 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 1.79 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 2.68 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 5.65 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 4.24 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.58 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.49 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 21.41 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 22.04 | MC |
| SRR1849784 | root | Control 120min | 0.52 | MC |
| SRR10690153 | leaf | IRBB5_0h | 7.84 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.20 | MC |
| SRR1061616 | panicle | Normal | 1.90 | MC |
| SRR1061617 | panicle | Heat Stress | 0.81 | MC |
| SRR1061614 | panicle | Normal | 0.32 | MC |
| SRR1061615 | panicle | Heat Stress | 0.68 | MC |
| SRR1061612 | panicle | Normal | 0.59 | MC |
| SRR1061613 | panicle | Heat Stress | 1.28 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 6.90 | MC |
| SRR9937394 | spikelet | sRNA apical spikelets | 0.60 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.42 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 2.74 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 2.10 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 4.23 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 1.07 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.73 | MC |
| SRR3140954 | leaf | "45C, 12h" | 4.81 | MC |
| SRR089621 | panicle | cold | 4.81 | MC |
| SRR089620 | panicle | drought | 5.79 | MC |
| SRR3140957 | leaf | "45C, 24h" | 4.06 | MC |
| SRR089622 | panicle | salt | 3.04 | MC |
| SRR504360 | leaf | Nipponbare | 28.66 | MC |
| SRR504361 | leaf | Nov-93 | 17.13 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 0.99 | MC |
| SRR2544786 | embryo | dry seed | 0.57 | MC |
| SRR4098172 | seedling | Cold (4C) | 3.82 | MC |
| SRR3140956 | leaf | "45C, 24h" | 5.30 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.48 | MC |
| SRR3140953 | leaf | "45C, 0h" | 2.73 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 2.12 | MC |
| SRR10956502 | panicle | WT | 0.72 | MC |
| SRR10956501 | panicle | WT | 0.75 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 4.70 | MC |
| SRR8258048 | leaf_sheath | R_bph | 7.78 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 6.23 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 6.71 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 7.07 | MC |
| SRR8258051 | leaf_sheath | R_bph | 8.31 | MC |