| SRR5120079 | leaf_sheath | PC_0 | 37.52 | HC |
| SRR10690152 | leaf | IRBB5_0h | 81.58 | HC |
| SRR6810106 | panicle | panicle | 16.81 | HC |
| SRR7058097 | leaf | rice_mock | 186.03 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 25.18 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 10.57 | HC |
| SRR7058098 | leaf | rice_RSV | 158.41 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 95.74 | HC |
| SRR10690151 | leaf | IRBB5_0h | 78.52 | HC |
| SRR2154072 | seed | Rathuwee_seed | 7.70 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 12.55 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 93.95 | HC |
| SRR1061625 | panicle | Heat Stress | 7.41 | HC |
| SRR1061624 | panicle | Normal | 16.70 | HC |
| SRR1061622 | flag_leaf | Normal | 37.97 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 30.67 | HC |
| SRR1061620 | flag_leaf | Normal | 42.49 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 89.63 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 101.82 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 34.53 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 64.83 | HC |
| SRR9070101 | shoot_base | WT_base | 14.24 | HC |
| SRR6810105 | panicle | panicle | 14.67 | HC |
| SRR089619 | panicle | control | 113.45 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 13.44 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 77.42 | HC |
| SRR6498701 | leaf | "WT, Control" | 53.85 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 76.41 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 112.29 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 10.14 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 45.96 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 46.77 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 52.72 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 24.55 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 41.79 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 9.77 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 17.03 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 34.62 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 18.38 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 21.21 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 39.33 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 51.73 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 37.20 | HC |
| SRR089621 | panicle | cold | 89.91 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 32.73 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 35.19 | HC |
| SRR1849771 | leaf | Control 120min | 36.54 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 18.09 | HC |
| SRR7058096 | leaf | rice_mock | 176.66 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 2.99 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 9.45 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 19.43 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 28.82 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 44.50 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 27.74 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 49.23 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 9.78 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 41.41 | HC |
| SRR2154075 | seed | Taipei309_seed | 6.27 | HC |
| SRR3140952 | leaf | "45C, 0h" | 9.70 | HC |
| SRR976171 | lamina_joint | wild type | 149.65 | HC |
| SRR4098208 | root | No treatment | 39.25 | HC |
| SRR4098209 | leaf | No treatment | 67.94 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 23.14 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 27.70 | HC |
| SRR9070100 | shoot_base | WT_base | 15.98 | HC |
| SRR4098205 | seedling | Heat (50C) | 26.31 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 31.61 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 27.93 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 32.09 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 32.65 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 39.69 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 32.29 | HC |
| SRR3130366 | leaf | control 0 hour | 14.99 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 3.33 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 2.85 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 6.31 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 26.61 | HC |
| SRR8649147 | panicle | panicle tissue | 17.54 | HC |
| SRR4098207 | panicle | No treatment | 9.50 | HC |
| SRR10704055 | leaf | CK | 17.46 | HC |
| SRR10704056 | leaf | CK | 15.89 | HC |
| SRR10704059 | leaf | Glyphosate | 44.24 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 29.99 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 34.78 | HC |
| SRR9070102 | shoot_base | WT_base | 10.16 | HC |
| SRR6498699 | leaf | "WT, Control" | 60.72 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 23.82 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 141.45 | HC |
| SRR10690144 | leaf | IR24_0h | 112.76 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 125.63 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 119.55 | HC |
| SRR10690143 | leaf | IR24_0h | 107.88 | HC |
| SRR10690142 | leaf | IR24_0h | 109.41 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 30.61 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 100.24 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 117.19 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 37.32 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 28.47 | HC |
| SRR4098203 | seedling | No treatment | 32.95 | HC |
| SRR6365693 | panicle | Wild type | 9.44 | HC |
| SRR6365694 | panicle | Wild type | 8.72 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 17.95 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 10.72 | HC |
| SRR6810101 | seedling | seedling | 63.25 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 36.69 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 10.61 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 21.08 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 128.67 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 106.62 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 33.85 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 32.60 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 52.49 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 20.29 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 138.12 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 20.80 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 14.61 | HC |
| SRR3110556 | shoot | shoot control | 164.91 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 39.37 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 23.22 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 79.47 | HC |
| SRR1061616 | panicle | Normal | 7.65 | HC |
| SRR1061617 | panicle | Heat Stress | 9.89 | HC |
| SRR1061614 | panicle | Normal | 8.09 | HC |
| SRR1061615 | panicle | Heat Stress | 12.88 | HC |
| SRR1061612 | panicle | Normal | 11.77 | HC |
| SRR1061613 | panicle | Heat Stress | 11.83 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 28.37 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 37.51 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 34.35 | HC |
| SRR1061618 | flag_leaf | Normal | 30.85 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 18.46 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 28.80 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 80.76 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 26.96 | HC |
| SRR089620 | panicle | drought | 94.49 | HC |
| SRR3140957 | leaf | "45C, 24h" | 12.55 | HC |
| SRR089622 | panicle | salt | 109.14 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 83.61 | HC |
| SRR2544786 | embryo | dry seed | 58.92 | HC |
| SRR4098172 | seedling | Cold (4C) | 12.54 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 29.87 | HC |
| SRR3140953 | leaf | "45C, 0h" | 8.30 | HC |
| SRR6810102 | seedling | seedling | 80.88 | HC |
| SRR10956502 | panicle | WT | 11.88 | HC |
| SRR10956501 | panicle | WT | 10.76 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 40.61 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 39.38 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 35.01 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 27.53 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 15.58 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 15.19 | HC |
| SRR3110557 | shoot | shoot treated | 256.18 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 11.47 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 20.44 | HC |