| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 400.99 | HC |
| SRR3140955 | leaf | "45C, 12h" | 90.86 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 442.24 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 24.15 | HC |
| SRR8258050 | leaf_sheath | R_bph | 484.25 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 42.54 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 552.59 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 288.98 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 197.17 | HC |
| SRR10690152 | leaf | IRBB5_0h | 709.16 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 136.12 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 485.02 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 533.25 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 21.91 | HC |
| SRR2154077 | seedling | KDM105_seedling | 24.65 | HC |
| SRR10690151 | leaf | IRBB5_0h | 752.46 | HC |
| SRR2154072 | seed | Rathuwee_seed | 6.79 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 6.37 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 522.80 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 27.94 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 698.87 | HC |
| SRR10704058 | leaf | Glyphosate | 215.89 | HC |
| SRR447128 | root | As(III) 20 uM | 66.26 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 772.91 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 12.42 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 22.85 | HC |
| SRR1013787 | panicle | PA64s_PA | 21.20 | HC |
| SRR504363 | leaf | 93-11 X NPB | 46.23 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 187.95 | HC |
| SRR1013789 | panicle | 93-11_PA | 6.45 | HC |
| SRR1013788 | panicle | LYP9_PA | 11.79 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 31.79 | HC |
| SRR089619 | panicle | control | 26.03 | HC |
| SRR447135 | shoot | As(III) 20 uM | 48.25 | HC |
| SRR447134 | shoot | As(III) 80 uM | 48.26 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 28.58 | HC |
| SRR447131 | root | As(III) 80 uM | 89.16 | HC |
| SRR447130 | root | As(III) 20 uM | 174.95 | HC |
| SRR1849765 | leaf | Control 30min | 100.03 | HC |
| SRR1849767 | leaf | Control 30min | 68.44 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 25.45 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 117.05 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 95.42 | HC |
| SRR6498701 | leaf | "WT, Control" | 69.35 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 128.76 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 13325.57 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 36.14 | HC |
| SRR3203907 | leaf | WT | 20.22 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 76.14 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 1564.83 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 1239.55 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1033.52 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 1953.25 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1069.11 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1528.86 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 3777.75 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1959.89 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1176.20 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 2316.20 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 5217.13 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 13.71 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 13.11 | HC |
| SRR447129 | root | As(III) 80 uM | 97.75 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 32.80 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 87.38 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 147.47 | HC |
| SRR1849773 | leaf | Control 120min | 116.36 | HC |
| SRR1849772 | leaf | Control 120min | 72.05 | HC |
| SRR1849771 | leaf | Control 120min | 134.87 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 100.72 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 100.89 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 51.29 | HC |
| SRR3130370 | leaf | control 8 hour | 88.78 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 82.00 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 50.05 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 27.52 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 30.30 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 62.79 | HC |
| SRR447136 | shoot | As(III) 80 uM | 48.56 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 19.62 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 31.31 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 36.26 | HC |
| SRR10704060 | leaf | Glyphosate | 218.68 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 42.37 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 26.09 | HC |
| SRR3140952 | leaf | "45C, 0h" | 316.67 | HC |
| SRR976171 | lamina_joint | wild type | 135.26 | HC |
| SRR4098209 | leaf | No treatment | 79.82 | HC |
| SRR3130369 | leaf | control 8 hour | 95.34 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 64.67 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 17.13 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 17.23 | HC |
| SRR4098205 | seedling | Heat (50C) | 63.04 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 17.86 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 16.29 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 13.89 | HC |
| SRR3130365 | leaf | control 0 hour | 99.51 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 27.98 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 68.98 | HC |
| SRR3130366 | leaf | control 0 hour | 89.06 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 3.47 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 2.30 | HC |
| SRR2862364 | leaf | mock leaf cells | 54.03 | HC |
| SRR2862365 | leaf | mock leaf cells | 26.13 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 235.36 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 38.07 | HC |
| SRR2862363 | leaf | mock leaf cells | 171.70 | HC |
| SRR4098207 | panicle | No treatment | 14.33 | HC |
| SRR10704055 | leaf | CK | 180.91 | HC |
| SRR10704057 | leaf | CK | 449.43 | HC |
| SRR10704056 | leaf | CK | 191.60 | HC |
| SRR10704059 | leaf | Glyphosate | 66.44 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 27.50 | HC |
| SRR6498699 | leaf | "WT, Control" | 72.53 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 26.12 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 38.79 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 10.20 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1133.48 | HC |
| SRR10690144 | leaf | IR24_0h | 1996.35 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 804.51 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1162.39 | HC |
| SRR10690143 | leaf | IR24_0h | 1656.18 | HC |
| SRR10690142 | leaf | IR24_0h | 1896.86 | HC |
| SRR2646852 | panicle | FP | 60.71 | HC |
| SRR2646853 | panicle | FP | 91.59 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 39.29 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 797.41 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 951.78 | HC |
| SRR2646854 | panicle | SP | 59.17 | HC |
| SRR2646855 | panicle | SP | 65.72 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 27.70 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 19.61 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 19.97 | HC |
| SRR4098203 | seedling | No treatment | 69.58 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 23.40 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 39.05 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 33.20 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 20.27 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 226.30 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 212.85 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 329.75 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 305.32 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 41.42 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 668.88 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1295.68 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1033.21 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 810.27 | HC |
| SRR1849784 | root | Control 120min | 83.67 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 760.48 | HC |
| SRR10690153 | leaf | IRBB5_0h | 1036.75 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 670.22 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 1026.48 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 951.89 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 877.92 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1479.66 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1019.79 | HC |
| SRR3110556 | shoot | shoot control | 184.87 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 5917.37 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 19.29 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 10396.47 | HC |
| SRR1061616 | panicle | Normal | 5.06 | HC |
| SRR1061617 | panicle | Heat Stress | 6.69 | HC |
| SRR1061615 | panicle | Heat Stress | 5.90 | HC |
| SRR1061613 | panicle | Heat Stress | 9.87 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 25.79 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12.70 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 16.05 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 132.18 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 290.63 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 10.87 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 163.86 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 166.99 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 142.40 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 200.02 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 14.88 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12.23 | HC |
| SRR3140954 | leaf | "45C, 12h" | 633.66 | HC |
| SRR089621 | panicle | cold | 34.52 | HC |
| SRR089620 | panicle | drought | 43.57 | HC |
| SRR3140957 | leaf | "45C, 24h" | 1530.56 | HC |
| SRR089622 | panicle | salt | 25.55 | HC |
| SRR504360 | leaf | Nipponbare | 72.89 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 16.00 | HC |
| SRR2544786 | embryo | dry seed | 10.69 | HC |
| SRR4098172 | seedling | Cold (4C) | 80.67 | HC |
| SRR3140956 | leaf | "45C, 24h" | 699.00 | HC |
| SRR3140953 | leaf | "45C, 0h" | 443.39 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 276.15 | HC |
| SRR10956502 | panicle | WT | 22.32 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 23.59 | HC |
| SRR10956501 | panicle | WT | 23.71 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 354.52 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 2279.52 | HC |
| SRR8258048 | leaf_sheath | R_bph | 510.14 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 13.35 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 50.09 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 53.37 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12.91 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 30.14 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 403.72 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 17.91 | HC |
| SRR1654490 | leaf | wild type | 21.74 | HC |
| SRR3110557 | shoot | shoot treated | 237.74 | HC |
| SRR5940086 | panicle | Wild type | 23.44 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 1169.90 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 1994.91 | HC |
| SRR8258051 | leaf_sheath | R_bph | 578.68 | HC |
| SRR504362 | leaf | NPB X 93-11 | 56.10 | HC |