| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 27.54 | HC |
| SRR7058096 | leaf | rice_mock | 84.93 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 24.47 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 22.31 | HC |
| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 477.15 | HC |
| SRR3140955 | leaf | "45C, 12h" | 89.04 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 481.43 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 28.74 | HC |
| SRR8258050 | leaf_sheath | R_bph | 523.20 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 48.23 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 620.40 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 322.89 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 215.95 | HC |
| SRR10690152 | leaf | IRBB5_0h | 2042.24 | HC |
| SRR7058097 | leaf | rice_mock | 60.20 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 144.90 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 1187.56 | HC |
| SRR7058098 | leaf | rice_RSV | 46.79 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 943.30 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 21.75 | HC |
| SRR2154077 | seedling | KDM105_seedling | 25.21 | HC |
| SRR10690151 | leaf | IRBB5_0h | 1777.66 | HC |
| SRR2154072 | seed | Rathuwee_seed | 6.91 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 6.73 | HC |
| SRR2154070 | seed | Guangluai4_seed | 6.01 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1004.19 | HC |
| SRR1061624 | panicle | Normal | 11.56 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 30.51 | HC |
| SRR1061620 | flag_leaf | Normal | 9.98 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1607.37 | HC |
| SRR10704058 | leaf | Glyphosate | 221.03 | HC |
| SRR447128 | root | As(III) 20 uM | 62.61 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1925.47 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 25.46 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 17.65 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 23.33 | HC |
| SRR1013787 | panicle | PA64s_PA | 21.20 | HC |
| SRR504363 | leaf | 93-11 X NPB | 47.42 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 208.22 | HC |
| SRR1013789 | panicle | 93-11_PA | 6.67 | HC |
| SRR1013788 | panicle | LYP9_PA | 11.70 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 32.01 | HC |
| SRR089619 | panicle | control | 33.89 | HC |
| SRR447135 | shoot | As(III) 20 uM | 50.79 | HC |
| SRR447134 | shoot | As(III) 80 uM | 55.04 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 29.27 | HC |
| SRR447131 | root | As(III) 80 uM | 87.66 | HC |
| SRR447130 | root | As(III) 20 uM | 168.87 | HC |
| SRR1849765 | leaf | Control 30min | 102.73 | HC |
| SRR1849767 | leaf | Control 30min | 72.97 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 26.72 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 119.47 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 113.41 | HC |
| SRR6498701 | leaf | "WT, Control" | 85.24 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 141.49 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 13821.79 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 39.83 | HC |
| SRR3203907 | leaf | WT | 21.29 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 84.97 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 2904.22 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 2384.37 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1977.88 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 4250.65 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1488.71 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 2571.32 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 5549.12 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 3095.47 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 2361.71 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 4527.37 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 5487.52 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 13.26 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 15.37 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 16.66 | HC |
| SRR447129 | root | As(III) 80 uM | 97.03 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 33.56 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 89.89 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 150.13 | HC |
| SRR1849773 | leaf | Control 120min | 119.65 | HC |
| SRR1849772 | leaf | Control 120min | 76.33 | HC |
| SRR1849771 | leaf | Control 120min | 140.80 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 106.00 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 100.89 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 51.00 | HC |
| SRR3130370 | leaf | control 8 hour | 88.84 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 82.14 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 50.20 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 3.51 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 27.71 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 37.33 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 18.35 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 70.43 | HC |
| SRR447136 | shoot | As(III) 80 uM | 49.62 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 23.95 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 38.64 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 39.43 | HC |
| SRR10704060 | leaf | Glyphosate | 223.31 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 49.98 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 30.05 | HC |
| SRR3140952 | leaf | "45C, 0h" | 312.22 | HC |
| SRR976171 | lamina_joint | wild type | 144.93 | HC |
| SRR4098209 | leaf | No treatment | 87.14 | HC |
| SRR3130369 | leaf | control 8 hour | 95.60 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 64.37 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 18.61 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 19.34 | HC |
| SRR4098205 | seedling | Heat (50C) | 68.55 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 19.52 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 20.96 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 16.87 | HC |
| SRR3130365 | leaf | control 0 hour | 99.69 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 30.48 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 69.31 | HC |
| SRR3130366 | leaf | control 0 hour | 88.77 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 3.45 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 4.78 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 3.23 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 2.92 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 4.35 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 2.84 | HC |
| SRR2862364 | leaf | mock leaf cells | 53.87 | HC |
| SRR2862365 | leaf | mock leaf cells | 26.13 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 241.66 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 37.75 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 39.24 | HC |
| SRR2862363 | leaf | mock leaf cells | 176.20 | HC |
| SRR4098207 | panicle | No treatment | 17.24 | HC |
| SRR10704055 | leaf | CK | 182.12 | HC |
| SRR10704057 | leaf | CK | 449.61 | HC |
| SRR10704056 | leaf | CK | 193.96 | HC |
| SRR10704059 | leaf | Glyphosate | 66.44 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 29.82 | HC |
| SRR6498699 | leaf | "WT, Control" | 85.47 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 26.28 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 38.96 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 13.13 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 2542.85 | HC |
| SRR10690144 | leaf | IR24_0h | 2906.21 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1419.21 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 2114.77 | HC |
| SRR10690143 | leaf | IR24_0h | 3590.49 | HC |
| SRR10690142 | leaf | IR24_0h | 3859.91 | HC |
| SRR2646852 | panicle | FP | 78.91 | HC |
| SRR2646853 | panicle | FP | 103.46 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 47.94 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 14.04 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1545.65 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1835.84 | HC |
| SRR2646854 | panicle | SP | 65.07 | HC |
| SRR2646855 | panicle | SP | 72.35 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 30.52 | HC |
| SRR4098203 | seedling | No treatment | 82.34 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 21.02 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 26.81 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 25.91 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 41.79 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 36.86 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 23.03 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 246.57 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 229.78 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 363.76 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 325.94 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 45.20 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 981.14 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1920.84 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2265.38 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1358.68 | HC |
| SRR1849784 | root | Control 120min | 81.06 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 2253.69 | HC |
| SRR10690153 | leaf | IRBB5_0h | 1588.24 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 1931.00 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 3170.29 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 2391.58 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2314.78 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 3711.53 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 1929.23 | HC |
| SRR3110556 | shoot | shoot control | 296.03 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 5837.88 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 20.81 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 10243.95 | HC |
| SRR1061616 | panicle | Normal | 7.50 | HC |
| SRR1061617 | panicle | Heat Stress | 9.13 | HC |
| SRR1061614 | panicle | Normal | 4.17 | HC |
| SRR1061615 | panicle | Heat Stress | 9.64 | HC |
| SRR1061613 | panicle | Heat Stress | 12.68 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 29.81 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 17.80 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 16.61 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 16.65 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 190.71 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 334.84 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 14.62 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 160.27 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 179.42 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 155.48 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 211.71 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 20.03 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 15.86 | HC |
| SRR3140954 | leaf | "45C, 12h" | 633.59 | HC |
| SRR089621 | panicle | cold | 45.56 | HC |
| SRR089620 | panicle | drought | 55.12 | HC |
| SRR3140957 | leaf | "45C, 24h" | 1535.20 | HC |
| SRR089622 | panicle | salt | 35.73 | HC |
| SRR504360 | leaf | Nipponbare | 75.19 | HC |
| SRR504361 | leaf | Nov-93 | 53.70 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 23.64 | HC |
| SRR2544786 | embryo | dry seed | 15.93 | HC |
| SRR4098172 | seedling | Cold (4C) | 89.74 | HC |
| SRR3140956 | leaf | "45C, 24h" | 699.00 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 17.79 | HC |
| SRR3140953 | leaf | "45C, 0h" | 438.32 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 303.45 | HC |
| SRR10956502 | panicle | WT | 28.22 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 23.31 | HC |
| SRR10956501 | panicle | WT | 29.52 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 377.61 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 5052.73 | HC |
| SRR8258048 | leaf_sheath | R_bph | 566.97 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 13.43 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 57.60 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 59.42 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 21.41 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 37.24 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 441.19 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 21.03 | HC |
| SRR1654490 | leaf | wild type | 21.74 | HC |
| SRR3110557 | shoot | shoot treated | 277.71 | HC |
| SRR5940086 | panicle | Wild type | 28.26 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 1205.55 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 2108.07 | HC |
| SRR8258051 | leaf_sheath | R_bph | 621.76 | HC |
| SRR504362 | leaf | NPB X 93-11 | 59.61 | HC |