| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 152.95 | HC |
| SRR3140955 | leaf | "45C, 12h" | 12.69 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 250.63 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 78.24 | HC |
| SRR8258050 | leaf_sheath | R_bph | 334.69 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 75.51 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 277.67 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 122.08 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 153.61 | HC |
| SRR10690152 | leaf | IRBB5_0h | 154.27 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 154.36 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 106.20 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 552.46 | HC |
| SRR10690151 | leaf | IRBB5_0h | 137.03 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 29.47 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 139.19 | HC |
| SRR1061625 | panicle | Heat Stress | 13.52 | HC |
| SRR1061624 | panicle | Normal | 37.00 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 60.74 | HC |
| SRR1061622 | flag_leaf | Normal | 9.94 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 17.42 | HC |
| SRR1061620 | flag_leaf | Normal | 13.08 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 158.39 | HC |
| SRR10704058 | leaf | Glyphosate | 29.42 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 168.09 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 822.49 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 50.61 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 61.02 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 18.06 | HC |
| SRR1013787 | panicle | PA64s_PA | 38.47 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 23.89 | HC |
| SRR1013789 | panicle | 93-11_PA | 8.18 | HC |
| SRR1013788 | panicle | LYP9_PA | 10.77 | HC |
| SRR9070101 | shoot_base | WT_base | 9.61 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 31.46 | HC |
| SRR089619 | panicle | control | 153.08 | HC |
| SRR447135 | shoot | As(III) 20 uM | 29.74 | HC |
| SRR447134 | shoot | As(III) 80 uM | 35.89 | HC |
| SRR447133 | shoot | As(III) 20 uM | 33.01 | HC |
| SRR1849767 | leaf | Control 30min | 36.26 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 93.88 | HC |
| SRR6498701 | leaf | "WT, Control" | 96.87 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 89.75 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 441.04 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 293.63 | HC |
| SRR3203907 | leaf | WT | 30.34 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 78.06 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 177.37 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 140.16 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 223.54 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 327.41 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 177.49 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 220.51 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 468.24 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 328.64 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 154.37 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 351.99 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 148.33 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 33.23 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 17.66 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 22.74 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 62.83 | HC |
| SRR1849772 | leaf | Control 120min | 40.30 | HC |
| SRR1849771 | leaf | Control 120min | 47.92 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 42.72 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 38.67 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 12.00 | HC |
| SRR3130370 | leaf | control 8 hour | 34.53 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 44.95 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 12.98 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 18.07 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 268.56 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 109.27 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 65.68 | HC |
| SRR447136 | shoot | As(III) 80 uM | 39.59 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 24.20 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 72.01 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 202.81 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 84.15 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 134.15 | HC |
| SRR3140952 | leaf | "45C, 0h" | 31.05 | HC |
| SRR976171 | lamina_joint | wild type | 403.78 | HC |
| SRR089774 | panicle | wild-type | 20.66 | HC |
| SRR089772 | panicle | wild-type | 13.74 | HC |
| SRR3130369 | leaf | control 8 hour | 26.45 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 23.46 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 185.35 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 18.93 | HC |
| SRR9070100 | shoot_base | WT_base | 6.40 | HC |
| SRR4098205 | seedling | Heat (50C) | 51.54 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 167.85 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 22.99 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 42.22 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 166.44 | HC |
| SRR3130365 | leaf | control 0 hour | 40.36 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 156.95 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 28.27 | HC |
| SRR3130366 | leaf | control 0 hour | 37.33 | HC |
| SRR2862364 | leaf | mock leaf cells | 99.39 | HC |
| SRR2862365 | leaf | mock leaf cells | 50.34 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 39.19 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 52.88 | HC |
| SRR8649147 | panicle | panicle tissue | 39.94 | HC |
| SRR4098207 | panicle | No treatment | 49.51 | HC |
| SRR10704055 | leaf | CK | 23.59 | HC |
| SRR10704057 | leaf | CK | 66.88 | HC |
| SRR10704056 | leaf | CK | 37.64 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 11.42 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 116.96 | HC |
| SRR9070102 | shoot_base | WT_base | 4.95 | HC |
| SRR6498699 | leaf | "WT, Control" | 90.86 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 21.74 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 19.08 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 163.33 | HC |
| SRR10690144 | leaf | IR24_0h | 346.90 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 203.78 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 177.29 | HC |
| SRR10690143 | leaf | IR24_0h | 265.16 | HC |
| SRR10690142 | leaf | IR24_0h | 335.48 | HC |
| SRR2646852 | panicle | FP | 85.21 | HC |
| SRR2646853 | panicle | FP | 119.05 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 206.18 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 29.30 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 126.84 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 172.10 | HC |
| SRR2646854 | panicle | SP | 55.04 | HC |
| SRR2646855 | panicle | SP | 100.35 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 163.73 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 511.19 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 123.11 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 38.15 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 91.98 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 150.18 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 591.21 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 96.64 | HC |
| SRR6365692 | panicle | Wild type | 11.02 | HC |
| SRR6365693 | panicle | Wild type | 12.88 | HC |
| SRR6365694 | panicle | Wild type | 10.75 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 233.97 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 63.57 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 93.32 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 102.79 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 802.09 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 23.74 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 265.59 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 165.19 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 521.79 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 47.25 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 93.64 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 215.81 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 146.91 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 311.09 | HC |
| SRR10690153 | leaf | IRBB5_0h | 138.33 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 166.69 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 253.59 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 259.10 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 205.13 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 242.77 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 160.38 | HC |
| SRR3110556 | shoot | shoot control | 347.70 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 151.34 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 24.80 | HC |
| SRR1061616 | panicle | Normal | 8.04 | HC |
| SRR1061617 | panicle | Heat Stress | 24.22 | HC |
| SRR1061614 | panicle | Normal | 12.32 | HC |
| SRR1061615 | panicle | Heat Stress | 26.60 | HC |
| SRR1061612 | panicle | Normal | 17.02 | HC |
| SRR1061613 | panicle | Heat Stress | 27.24 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 44.53 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 15.31 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 55.21 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 18.38 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 24.94 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 59.75 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 44.44 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 102.91 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 90.00 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 96.57 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 115.09 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 36.27 | HC |
| SRR3140954 | leaf | "45C, 12h" | 81.16 | HC |
| SRR089621 | panicle | cold | 247.05 | HC |
| SRR089620 | panicle | drought | 276.34 | HC |
| SRR3140957 | leaf | "45C, 24h" | 155.89 | HC |
| SRR089622 | panicle | salt | 121.46 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 81.01 | HC |
| SRR2544786 | embryo | dry seed | 34.30 | HC |
| SRR4098172 | seedling | Cold (4C) | 45.12 | HC |
| SRR3140956 | leaf | "45C, 24h" | 80.85 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 29.71 | HC |
| SRR3140953 | leaf | "45C, 0h" | 21.86 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 92.81 | HC |
| SRR10956502 | panicle | WT | 61.78 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 57.16 | HC |
| SRR10956501 | panicle | WT | 75.35 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 273.54 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 480.24 | HC |
| SRR8258048 | leaf_sheath | R_bph | 329.10 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 60.82 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 68.86 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 18.54 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 52.21 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 324.67 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 198.76 | HC |
| SRR1654490 | leaf | wild type | 36.43 | HC |
| SRR3110557 | shoot | shoot treated | 188.96 | HC |
| SRR5940086 | panicle | Wild type | 138.82 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 63.18 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 83.33 | HC |
| SRR8258051 | leaf_sheath | R_bph | 412.00 | HC |