| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 16775.47 | HC |
| SRR3140955 | leaf | "45C, 12h" | 48.55 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 31044.38 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 110.97 | HC |
| SRR8258050 | leaf_sheath | R_bph | 24185.47 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 5747.61 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 23061.89 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 20267.45 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 25043.23 | HC |
| SRR10690152 | leaf | IRBB5_0h | 37566.95 | HC |
| SRR6810106 | panicle | panicle | 866.39 | HC |
| SRR7058097 | leaf | rice_mock | 1069.98 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 1861.71 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 3467.65 | HC |
| SRR7058098 | leaf | rice_RSV | 1018.67 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 24049.49 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 128.26 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 48072.36 | HC |
| SRR2154077 | seedling | KDM105_seedling | 65715.27 | HC |
| SRR2154074 | seed | Nipponbare_seed | 10052.18 | HC |
| SRR10690151 | leaf | IRBB5_0h | 42108.84 | HC |
| SRR2154072 | seed | Rathuwee_seed | 2775.21 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 7660.92 | HC |
| SRR2154070 | seed | Guangluai4_seed | 3895.05 | HC |
| SRR2154071 | seed | KDM105_seed | 1591.56 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 821.63 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 16726.21 | HC |
| SRR1061625 | panicle | Heat Stress | 450.89 | HC |
| SRR1061624 | panicle | Normal | 1666.39 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 9921.32 | HC |
| SRR1061622 | flag_leaf | Normal | 4172.08 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 2422.02 | HC |
| SRR1061620 | flag_leaf | Normal | 4691.55 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 31894.89 | HC |
| SRR10704058 | leaf | Glyphosate | 691.90 | HC |
| SRR447128 | root | As(III) 20 uM | 490.92 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 37992.77 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 376.73 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 581.82 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 13648.61 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 10279.70 | HC |
| SRR1013787 | panicle | PA64s_PA | 30806.70 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 20046.87 | HC |
| SRR504363 | leaf | 93-11 X NPB | 15264.04 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 2157.09 | HC |
| SRR1013789 | panicle | 93-11_PA | 20973.94 | HC |
| SRR1013788 | panicle | LYP9_PA | 24054.17 | HC |
| SRR9070101 | shoot_base | WT_base | 111.07 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 48509.64 | HC |
| SRR6810105 | panicle | panicle | 863.34 | HC |
| SRR089619 | panicle | control | 1511.35 | HC |
| SRR447135 | shoot | As(III) 20 uM | 1480.97 | HC |
| SRR447134 | shoot | As(III) 80 uM | 1740.86 | HC |
| SRR447133 | shoot | As(III) 20 uM | 325.88 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 1870.88 | HC |
| SRR447131 | root | As(III) 80 uM | 904.12 | HC |
| SRR447130 | root | As(III) 20 uM | 1653.18 | HC |
| SRR1849765 | leaf | Control 30min | 2840.08 | HC |
| SRR1849767 | leaf | Control 30min | 3417.50 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 423.89 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 2338.00 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 1230.02 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 19604.67 | HC |
| SRR6498701 | leaf | "WT, Control" | 6142.76 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 3211.35 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 4963.42 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 639.06 | HC |
| SRR3203907 | leaf | WT | 105193.62 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 6561.68 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 22733.54 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 18267.08 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 3786.71 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 6905.81 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 1659.59 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 3381.57 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 6391.49 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 5725.69 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 7164.49 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 11216.21 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 7204.57 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 529.94 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 368.35 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 357.99 | HC |
| SRR447129 | root | As(III) 80 uM | 392.37 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 1074.74 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 1956.30 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 2777.09 | HC |
| SRR1849773 | leaf | Control 120min | 2925.39 | HC |
| SRR1849772 | leaf | Control 120min | 1836.84 | HC |
| SRR1849771 | leaf | Control 120min | 2292.92 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 3507.49 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 83555.28 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 32664.83 | HC |
| SRR3130370 | leaf | control 8 hour | 47911.88 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 69586.29 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 36777.85 | HC |
| SRR7058096 | leaf | rice_mock | 939.49 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 526.53 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 952.15 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 51481.29 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 425.27 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 935.50 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 3827.88 | HC |
| SRR6365689 | seedling | Wild type | 940.44 | HC |
| SRR447136 | shoot | As(III) 80 uM | 1040.96 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 503.66 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 6157.55 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 411.67 | HC |
| SRR10704060 | leaf | Glyphosate | 780.90 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 5928.05 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 145.14 | HC |
| SRR2154075 | seed | Taipei309_seed | 7526.83 | HC |
| SRR3140952 | leaf | "45C, 0h" | 104.02 | HC |
| SRR976171 | lamina_joint | wild type | 14975.82 | HC |
| SRR4098208 | root | No treatment | 3472.54 | HC |
| SRR089774 | panicle | wild-type | 711.87 | HC |
| SRR089772 | panicle | wild-type | 899.47 | HC |
| SRR4098209 | leaf | No treatment | 2179.52 | HC |
| SRR3130369 | leaf | control 8 hour | 43413.82 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 46083.00 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1018.06 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 436.75 | HC |
| SRR9070100 | shoot_base | WT_base | 136.08 | HC |
| SRR4098205 | seedling | Heat (50C) | 577.34 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 4384.49 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 777.84 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 447.06 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 447.66 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 855.95 | HC |
| SRR3130365 | leaf | control 0 hour | 45975.53 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 893.52 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 41046.61 | HC |
| SRR3130366 | leaf | control 0 hour | 52374.82 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 264.02 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 268.23 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 173.20 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 677.40 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 831.15 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 837.08 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 1085.52 | HC |
| SRR2862364 | leaf | mock leaf cells | 40141.81 | HC |
| SRR2862365 | leaf | mock leaf cells | 32245.92 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 43616.68 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 46263.61 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 2975.27 | HC |
| SRR2862363 | leaf | mock leaf cells | 47664.33 | HC |
| SRR8649147 | panicle | panicle tissue | 854.42 | HC |
| SRR4098207 | panicle | No treatment | 1462.81 | HC |
| SRR10704055 | leaf | CK | 585.55 | HC |
| SRR10704057 | leaf | CK | 1246.27 | HC |
| SRR10704056 | leaf | CK | 562.95 | HC |
| SRR10704059 | leaf | Glyphosate | 193.16 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 2562.76 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 874.79 | HC |
| SRR9070102 | shoot_base | WT_base | 84.55 | HC |
| SRR6498699 | leaf | "WT, Control" | 9122.95 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 60084.13 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 55464.84 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 362.67 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 23361.39 | HC |
| SRR10690144 | leaf | IR24_0h | 40889.53 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 27807.79 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 37925.12 | HC |
| SRR10690143 | leaf | IR24_0h | 57242.09 | HC |
| SRR10690142 | leaf | IR24_0h | 44724.06 | HC |
| SRR2646852 | panicle | FP | 2525.12 | HC |
| SRR2646853 | panicle | FP | 3694.72 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 785.74 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 397.77 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 30127.60 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 31967.65 | HC |
| SRR2646854 | panicle | SP | 2044.28 | HC |
| SRR2646855 | panicle | SP | 2012.78 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 540.55 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 194.99 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 219.81 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 223.33 | HC |
| SRR4098203 | seedling | No treatment | 2931.85 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 195.57 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 160.18 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 241.41 | HC |
| SRR6365690 | seedling | Wild type | 1119.35 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 95.88 | HC |
| SRR6365692 | panicle | Wild type | 3710.10 | HC |
| SRR6365693 | panicle | Wild type | 3689.97 | HC |
| SRR6365694 | panicle | Wild type | 3398.39 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1296.42 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 611.17 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 102.75 | HC |
| SRR6810101 | seedling | seedling | 5199.85 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 19622.75 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 16205.83 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 192.78 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 462.69 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 13676.74 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 18592.80 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 71.99 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 4273.54 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 9524.07 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 31846.95 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 29950.71 | HC |
| SRR1849784 | root | Control 120min | 484.81 | HC |
| SRR6365691 | panicle | Wild type | 3533.02 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 3082.99 | HC |
| SRR10690153 | leaf | IRBB5_0h | 58238.36 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 3075.61 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 7036.35 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 5192.90 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 38442.67 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 5643.29 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 3141.78 | HC |
| SRR3110556 | shoot | shoot control | 20752.79 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 2324.01 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 811.35 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 4654.52 | HC |
| SRR1061616 | panicle | Normal | 1139.77 | HC |
| SRR1061617 | panicle | Heat Stress | 1518.32 | HC |
| SRR1061614 | panicle | Normal | 1379.10 | HC |
| SRR1061615 | panicle | Heat Stress | 1634.53 | HC |
| SRR1061612 | panicle | Normal | 1735.58 | HC |
| SRR1061613 | panicle | Heat Stress | 1342.84 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 187.55 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 547.58 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2347.60 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 4721.17 | HC |
| SRR1061618 | flag_leaf | Normal | 3970.58 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 3717.49 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 695.21 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 985.49 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 628.91 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 566.24 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 15334.59 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 16229.69 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 13811.39 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 5306.04 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 564.69 | HC |
| SRR3140954 | leaf | "45C, 12h" | 599.69 | HC |
| SRR089621 | panicle | cold | 2000.17 | HC |
| SRR089620 | panicle | drought | 2483.58 | HC |
| SRR3140957 | leaf | "45C, 24h" | 270.12 | HC |
| SRR089622 | panicle | salt | 1450.50 | HC |
| SRR504360 | leaf | Nipponbare | 8636.51 | HC |
| SRR504361 | leaf | Nov-93 | 6441.91 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 3297.66 | HC |
| SRR2544786 | embryo | dry seed | 1264.81 | HC |
| SRR4098172 | seedling | Cold (4C) | 982.49 | HC |
| SRR3140956 | leaf | "45C, 24h" | 186.46 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 556.84 | HC |
| SRR3140953 | leaf | "45C, 0h" | 153.58 | HC |
| SRR6810102 | seedling | seedling | 5217.22 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 15949.67 | HC |
| SRR10956502 | panicle | WT | 1039.91 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 29178.43 | HC |
| SRR10956501 | panicle | WT | 1006.11 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 16358.14 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 6770.56 | HC |
| SRR8258048 | leaf_sheath | R_bph | 17921.23 | HC |
| SRR1740023 | seedling | IR64-Control | 4922.17 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 36441.66 | HC |
| SRR1740025 | seedling | PK-Control | 4026.03 | HC |
| SRR1740024 | seedling | N22-Control | 4793.96 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 4068.13 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 4190.89 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 530.53 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 490.33 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 18426.26 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 273.46 | HC |
| SRR1654490 | leaf | wild type | 107457.99 | HC |
| SRR3110557 | shoot | shoot treated | 21444.30 | HC |
| SRR5940086 | panicle | Wild type | 837.15 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 355.26 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 459.73 | HC |
| SRR8258051 | leaf_sheath | R_bph | 19758.23 | HC |
| SRR504362 | leaf | NPB X 93-11 | 7741.82 | HC |