| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 3216.67 | HC |
| SRR3140955 | leaf | "45C, 12h" | 60.65 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 4584.28 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 253.21 | HC |
| SRR8258050 | leaf_sheath | R_bph | 5673.21 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 1405.14 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 4028.40 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 3719.89 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 2761.40 | HC |
| SRR10690152 | leaf | IRBB5_0h | 7400.16 | HC |
| SRR6810106 | panicle | panicle | 176.03 | HC |
| SRR7058097 | leaf | rice_mock | 6146.85 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 223.19 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 221.39 | HC |
| SRR7058098 | leaf | rice_RSV | 4534.55 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 5058.45 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 634.36 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 11761.68 | HC |
| SRR2154077 | seedling | KDM105_seedling | 4443.62 | HC |
| SRR2154074 | seed | Nipponbare_seed | 1152.46 | HC |
| SRR10690151 | leaf | IRBB5_0h | 8687.22 | HC |
| SRR2154072 | seed | Rathuwee_seed | 817.79 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 2315.39 | HC |
| SRR2154070 | seed | Guangluai4_seed | 1238.38 | HC |
| SRR2154071 | seed | KDM105_seed | 1422.59 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 2742.23 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5425.58 | HC |
| SRR1061625 | panicle | Heat Stress | 157.63 | HC |
| SRR1061624 | panicle | Normal | 666.96 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1644.54 | HC |
| SRR1061622 | flag_leaf | Normal | 1302.17 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 2223.81 | HC |
| SRR1061620 | flag_leaf | Normal | 1338.61 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 8177.83 | HC |
| SRR10704058 | leaf | Glyphosate | 2289.98 | HC |
| SRR447128 | root | As(III) 20 uM | 200.71 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 9089.11 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 864.42 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 38.32 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 51633.30 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 39114.59 | HC |
| SRR1013787 | panicle | PA64s_PA | 8601.09 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 87512.76 | HC |
| SRR504363 | leaf | 93-11 X NPB | 15706.31 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 530.02 | HC |
| SRR1013789 | panicle | 93-11_PA | 4173.56 | HC |
| SRR1013788 | panicle | LYP9_PA | 5070.27 | HC |
| SRR9070101 | shoot_base | WT_base | 97.48 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 20411.66 | HC |
| SRR6810105 | panicle | panicle | 157.77 | HC |
| SRR089619 | panicle | control | 3047.27 | HC |
| SRR447135 | shoot | As(III) 20 uM | 768.13 | HC |
| SRR447134 | shoot | As(III) 80 uM | 345.35 | HC |
| SRR447133 | shoot | As(III) 20 uM | 750.60 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 524.81 | HC |
| SRR447131 | root | As(III) 80 uM | 380.35 | HC |
| SRR447130 | root | As(III) 20 uM | 490.14 | HC |
| SRR1849765 | leaf | Control 30min | 1207.58 | HC |
| SRR1849767 | leaf | Control 30min | 1353.29 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 260.94 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 1647.16 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 136.71 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 2795.77 | HC |
| SRR6498701 | leaf | "WT, Control" | 2163.94 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 3179.03 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 8708.91 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 70.25 | HC |
| SRR3203907 | leaf | WT | 38184.52 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 2139.74 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 5629.60 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 3801.14 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1169.46 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 2879.21 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 439.54 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1653.79 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 1922.33 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1594.45 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 2233.17 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 4447.61 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 3656.07 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 33.63 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 28.47 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 35.00 | HC |
| SRR447129 | root | As(III) 80 uM | 143.25 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 436.29 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 1332.07 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 1525.36 | HC |
| SRR1849773 | leaf | Control 120min | 1416.59 | HC |
| SRR1849772 | leaf | Control 120min | 1466.79 | HC |
| SRR1849771 | leaf | Control 120min | 1527.12 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 1427.05 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 17200.80 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 3875.13 | HC |
| SRR3130370 | leaf | control 8 hour | 12532.45 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 13790.55 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 4405.47 | HC |
| SRR7058096 | leaf | rice_mock | 7049.84 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 30.35 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 49.10 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 12212.48 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 102.39 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 385.73 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 836.37 | HC |
| SRR6365689 | seedling | Wild type | 57.63 | HC |
| SRR447136 | shoot | As(III) 80 uM | 536.56 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 27.29 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 1166.87 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 111.96 | HC |
| SRR10704060 | leaf | Glyphosate | 1831.96 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 1116.74 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 437.23 | HC |
| SRR2154075 | seed | Taipei309_seed | 1263.25 | HC |
| SRR3140952 | leaf | "45C, 0h" | 371.99 | HC |
| SRR976171 | lamina_joint | wild type | 2152.26 | HC |
| SRR4098208 | root | No treatment | 1873.49 | HC |
| SRR089774 | panicle | wild-type | 554.76 | HC |
| SRR089772 | panicle | wild-type | 686.13 | HC |
| SRR4098209 | leaf | No treatment | 4224.54 | HC |
| SRR3130369 | leaf | control 8 hour | 11429.05 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 9388.39 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 352.68 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 31.37 | HC |
| SRR9070100 | shoot_base | WT_base | 106.72 | HC |
| SRR4098205 | seedling | Heat (50C) | 1504.50 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 2233.85 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 322.59 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 19.69 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 33.11 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 415.02 | HC |
| SRR3130365 | leaf | control 0 hour | 10401.91 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 403.30 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 8473.71 | HC |
| SRR3130366 | leaf | control 0 hour | 12373.75 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 70.04 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 68.44 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 38.80 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 31.37 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 23.36 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 21.08 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 51.30 | HC |
| SRR2862364 | leaf | mock leaf cells | 41846.34 | HC |
| SRR2862365 | leaf | mock leaf cells | 27074.37 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 54917.92 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 7484.98 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1874.49 | HC |
| SRR2862363 | leaf | mock leaf cells | 51290.33 | HC |
| SRR8649147 | panicle | panicle tissue | 113.90 | HC |
| SRR4098207 | panicle | No treatment | 966.45 | HC |
| SRR10704055 | leaf | CK | 1871.88 | HC |
| SRR10704057 | leaf | CK | 3913.25 | HC |
| SRR10704056 | leaf | CK | 1990.52 | HC |
| SRR10704059 | leaf | Glyphosate | 1377.70 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 1444.15 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 320.51 | HC |
| SRR9070102 | shoot_base | WT_base | 79.87 | HC |
| SRR6498699 | leaf | "WT, Control" | 1576.26 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 9074.35 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 11693.39 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 29.80 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 11512.95 | HC |
| SRR10690144 | leaf | IR24_0h | 13826.09 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 6863.46 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 10340.00 | HC |
| SRR10690143 | leaf | IR24_0h | 16736.77 | HC |
| SRR10690142 | leaf | IR24_0h | 15038.32 | HC |
| SRR2646852 | panicle | FP | 65.13 | HC |
| SRR2646853 | panicle | FP | 100.10 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 191.36 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 34.99 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 7267.30 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 7969.39 | HC |
| SRR2646854 | panicle | SP | 45.31 | HC |
| SRR2646855 | panicle | SP | 60.33 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 53.78 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 791.92 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 351.29 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 491.42 | HC |
| SRR4098203 | seedling | No treatment | 1300.64 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 263.26 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 503.70 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 511.04 | HC |
| SRR6365690 | seedling | Wild type | 58.10 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 293.28 | HC |
| SRR6365692 | panicle | Wild type | 117.47 | HC |
| SRR6365693 | panicle | Wild type | 249.92 | HC |
| SRR6365694 | panicle | Wild type | 237.59 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 174.95 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 80.52 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 111.35 | HC |
| SRR6810101 | seedling | seedling | 2665.81 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 2779.70 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 3187.33 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 497.13 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 689.25 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 2913.86 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 3388.19 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 615.25 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 366.98 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 897.89 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 9474.60 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 7202.50 | HC |
| SRR1849784 | root | Control 120min | 163.17 | HC |
| SRR6365691 | panicle | Wild type | 117.21 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 254.82 | HC |
| SRR10690153 | leaf | IRBB5_0h | 4725.56 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 119.96 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 160.30 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 330.10 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 10447.66 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1169.50 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 479.65 | HC |
| SRR3110556 | shoot | shoot control | 30771.47 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 4351.32 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 320.46 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 8907.90 | HC |
| SRR1061616 | panicle | Normal | 342.34 | HC |
| SRR1061617 | panicle | Heat Stress | 585.74 | HC |
| SRR1061614 | panicle | Normal | 261.26 | HC |
| SRR1061615 | panicle | Heat Stress | 793.47 | HC |
| SRR1061612 | panicle | Normal | 272.57 | HC |
| SRR1061613 | panicle | Heat Stress | 371.48 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 61.44 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 27.89 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2431.09 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 1936.42 | HC |
| SRR1061618 | flag_leaf | Normal | 765.93 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 1045.38 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 1387.29 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 1666.66 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 31.89 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 874.03 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 2034.55 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 2006.51 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 2741.26 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 486.01 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 25.11 | HC |
| SRR3140954 | leaf | "45C, 12h" | 406.77 | HC |
| SRR089621 | panicle | cold | 4045.70 | HC |
| SRR089620 | panicle | drought | 4602.61 | HC |
| SRR3140957 | leaf | "45C, 24h" | 925.02 | HC |
| SRR089622 | panicle | salt | 2882.02 | HC |
| SRR504360 | leaf | Nipponbare | 6493.95 | HC |
| SRR504361 | leaf | Nov-93 | 19476.24 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 578.14 | HC |
| SRR2544786 | embryo | dry seed | 333.49 | HC |
| SRR4098172 | seedling | Cold (4C) | 1087.61 | HC |
| SRR3140956 | leaf | "45C, 24h" | 265.68 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 28.28 | HC |
| SRR3140953 | leaf | "45C, 0h" | 288.93 | HC |
| SRR6810102 | seedling | seedling | 3408.17 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 3293.19 | HC |
| SRR10956502 | panicle | WT | 335.83 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 31401.60 | HC |
| SRR10956501 | panicle | WT | 357.18 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 3398.60 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 474.18 | HC |
| SRR8258048 | leaf_sheath | R_bph | 6332.82 | HC |
| SRR1740023 | seedling | IR64-Control | 136.01 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 11308.48 | HC |
| SRR1740025 | seedling | PK-Control | 129.74 | HC |
| SRR1740024 | seedling | N22-Control | 98.72 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 1062.38 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 1031.69 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 26.67 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 25.67 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 3132.66 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 88.58 | HC |
| SRR1654490 | leaf | wild type | 47047.65 | HC |
| SRR3110557 | shoot | shoot treated | 53191.82 | HC |
| SRR5940086 | panicle | Wild type | 634.24 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 476.35 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 307.16 | HC |
| SRR8258051 | leaf_sheath | R_bph | 6422.43 | HC |
| SRR504362 | leaf | NPB X 93-11 | 14298.37 | HC |