| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 3211.65 | HC |
| SRR3140955 | leaf | "45C, 12h" | 60.85 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 4579.04 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 253.06 | HC |
| SRR8258050 | leaf_sheath | R_bph | 5663.58 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 1403.69 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 4022.23 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 3712.84 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 2758.14 | HC |
| SRR10690152 | leaf | IRBB5_0h | 7380.06 | HC |
| SRR6810106 | panicle | panicle | 175.81 | HC |
| SRR7058097 | leaf | rice_mock | 6145.44 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 222.82 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 222.47 | HC |
| SRR7058098 | leaf | rice_RSV | 4531.88 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 5045.70 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 634.36 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 11753.64 | HC |
| SRR2154077 | seedling | KDM105_seedling | 4440.21 | HC |
| SRR2154074 | seed | Nipponbare_seed | 1151.53 | HC |
| SRR10690151 | leaf | IRBB5_0h | 8664.15 | HC |
| SRR2154072 | seed | Rathuwee_seed | 816.40 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 2315.04 | HC |
| SRR2154070 | seed | Guangluai4_seed | 1237.82 | HC |
| SRR2154071 | seed | KDM105_seed | 1420.56 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 2741.47 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5411.97 | HC |
| SRR1061625 | panicle | Heat Stress | 157.71 | HC |
| SRR1061624 | panicle | Normal | 666.88 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 1645.67 | HC |
| SRR1061622 | flag_leaf | Normal | 1301.33 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 2223.16 | HC |
| SRR1061620 | flag_leaf | Normal | 1336.97 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 8159.14 | HC |
| SRR10704058 | leaf | Glyphosate | 2293.50 | HC |
| SRR447128 | root | As(III) 20 uM | 200.18 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 9067.39 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 865.02 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 37.93 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 51587.50 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 39071.64 | HC |
| SRR1013787 | panicle | PA64s_PA | 8595.75 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 87447.88 | HC |
| SRR504363 | leaf | 93-11 X NPB | 15696.29 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 529.22 | HC |
| SRR1013789 | panicle | 93-11_PA | 4170.34 | HC |
| SRR1013788 | panicle | LYP9_PA | 5062.19 | HC |
| SRR9070101 | shoot_base | WT_base | 96.96 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 20328.98 | HC |
| SRR6810105 | panicle | panicle | 157.58 | HC |
| SRR089619 | panicle | control | 3048.73 | HC |
| SRR447135 | shoot | As(III) 20 uM | 766.14 | HC |
| SRR447134 | shoot | As(III) 80 uM | 342.55 | HC |
| SRR447133 | shoot | As(III) 20 uM | 746.18 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 524.12 | HC |
| SRR447131 | root | As(III) 80 uM | 379.68 | HC |
| SRR447130 | root | As(III) 20 uM | 486.84 | HC |
| SRR1849765 | leaf | Control 30min | 1212.54 | HC |
| SRR1849767 | leaf | Control 30min | 1356.47 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 262.21 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 1650.18 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 135.70 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 2793.28 | HC |
| SRR6498701 | leaf | "WT, Control" | 2162.78 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 3177.54 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 8700.74 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 70.25 | HC |
| SRR3203907 | leaf | WT | 38184.51 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 2137.84 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 5626.05 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 3799.06 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1169.00 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 2878.24 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 438.83 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1652.97 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 1919.43 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1591.54 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 2231.76 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 4444.60 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 3650.91 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 33.63 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 28.47 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 35.06 | HC |
| SRR447129 | root | As(III) 80 uM | 143.01 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 437.06 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 1333.95 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 1529.62 | HC |
| SRR1849773 | leaf | Control 120min | 1422.63 | HC |
| SRR1849772 | leaf | Control 120min | 1470.45 | HC |
| SRR1849771 | leaf | Control 120min | 1528.11 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 1428.63 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 17196.33 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 3873.66 | HC |
| SRR3130370 | leaf | control 8 hour | 12522.75 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 13781.29 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 4403.66 | HC |
| SRR7058096 | leaf | rice_mock | 7050.05 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 30.05 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 48.34 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 12194.33 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 102.39 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 385.99 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 833.83 | HC |
| SRR6365689 | seedling | Wild type | 57.63 | HC |
| SRR447136 | shoot | As(III) 80 uM | 535.51 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 27.29 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 1164.72 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 111.96 | HC |
| SRR10704060 | leaf | Glyphosate | 1837.51 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 1115.22 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 437.23 | HC |
| SRR2154075 | seed | Taipei309_seed | 1260.98 | HC |
| SRR3140952 | leaf | "45C, 0h" | 374.31 | HC |
| SRR976171 | lamina_joint | wild type | 2151.53 | HC |
| SRR4098208 | root | No treatment | 1873.40 | HC |
| SRR089774 | panicle | wild-type | 545.17 | HC |
| SRR089772 | panicle | wild-type | 679.67 | HC |
| SRR4098209 | leaf | No treatment | 4223.50 | HC |
| SRR3130369 | leaf | control 8 hour | 11423.72 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 9381.95 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 353.02 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 31.45 | HC |
| SRR9070100 | shoot_base | WT_base | 105.88 | HC |
| SRR4098205 | seedling | Heat (50C) | 1503.65 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 2231.52 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 322.80 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 19.69 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 33.02 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 415.18 | HC |
| SRR3130365 | leaf | control 0 hour | 10396.05 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 403.53 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 8467.78 | HC |
| SRR3130366 | leaf | control 0 hour | 12371.00 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 69.94 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 67.78 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 38.57 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 30.95 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 22.89 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 20.84 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 50.49 | HC |
| SRR2862364 | leaf | mock leaf cells | 41878.86 | HC |
| SRR2862365 | leaf | mock leaf cells | 27098.88 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 54940.79 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 7492.18 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1874.49 | HC |
| SRR2862363 | leaf | mock leaf cells | 51323.56 | HC |
| SRR8649147 | panicle | panicle tissue | 113.90 | HC |
| SRR4098207 | panicle | No treatment | 966.17 | HC |
| SRR10704055 | leaf | CK | 1885.24 | HC |
| SRR10704057 | leaf | CK | 3930.04 | HC |
| SRR10704056 | leaf | CK | 2003.33 | HC |
| SRR10704059 | leaf | Glyphosate | 1388.22 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 1442.94 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 321.04 | HC |
| SRR9070102 | shoot_base | WT_base | 79.26 | HC |
| SRR6498699 | leaf | "WT, Control" | 1575.12 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 9053.10 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 11677.02 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 29.90 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 11484.23 | HC |
| SRR10690144 | leaf | IR24_0h | 13792.38 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 6845.52 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 10315.77 | HC |
| SRR10690143 | leaf | IR24_0h | 16696.33 | HC |
| SRR10690142 | leaf | IR24_0h | 15005.44 | HC |
| SRR2646852 | panicle | FP | 65.13 | HC |
| SRR2646853 | panicle | FP | 99.92 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 191.61 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 34.99 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 7252.42 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 7950.36 | HC |
| SRR2646854 | panicle | SP | 45.31 | HC |
| SRR2646855 | panicle | SP | 60.33 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 53.78 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 792.64 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 351.29 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 491.92 | HC |
| SRR4098203 | seedling | No treatment | 1300.15 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 263.12 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 503.81 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 511.17 | HC |
| SRR6365690 | seedling | Wild type | 58.10 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 293.28 | HC |
| SRR6365692 | panicle | Wild type | 117.47 | HC |
| SRR6365693 | panicle | Wild type | 249.76 | HC |
| SRR6365694 | panicle | Wild type | 237.43 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 175.24 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 80.78 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 111.35 | HC |
| SRR6810101 | seedling | seedling | 2664.35 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 2776.59 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 3182.76 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 497.13 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 689.70 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 2909.10 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 3380.95 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 615.88 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 366.07 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 897.99 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 9450.02 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 7183.90 | HC |
| SRR1849784 | root | Control 120min | 163.17 | HC |
| SRR6365691 | panicle | Wild type | 117.65 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 254.60 | HC |
| SRR10690153 | leaf | IRBB5_0h | 4710.07 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 119.87 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 160.02 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 329.91 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 10424.66 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1169.37 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 479.46 | HC |
| SRR3110556 | shoot | shoot control | 30773.26 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 4352.08 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 320.82 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 8909.11 | HC |
| SRR1061616 | panicle | Normal | 342.26 | HC |
| SRR1061617 | panicle | Heat Stress | 585.62 | HC |
| SRR1061614 | panicle | Normal | 261.19 | HC |
| SRR1061615 | panicle | Heat Stress | 793.19 | HC |
| SRR1061612 | panicle | Normal | 272.53 | HC |
| SRR1061613 | panicle | Heat Stress | 371.12 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 61.44 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 27.89 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2430.71 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 1934.52 | HC |
| SRR1061618 | flag_leaf | Normal | 765.70 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 1044.31 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 1385.91 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 1664.62 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 31.89 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 872.64 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 2032.46 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 2004.41 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 2737.60 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 486.35 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 25.00 | HC |
| SRR3140954 | leaf | "45C, 12h" | 408.75 | HC |
| SRR089621 | panicle | cold | 4047.50 | HC |
| SRR089620 | panicle | drought | 4607.29 | HC |
| SRR3140957 | leaf | "45C, 24h" | 928.62 | HC |
| SRR089622 | panicle | salt | 2882.91 | HC |
| SRR504360 | leaf | Nipponbare | 6479.89 | HC |
| SRR504361 | leaf | Nov-93 | 19267.72 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 578.56 | HC |
| SRR2544786 | embryo | dry seed | 333.54 | HC |
| SRR4098172 | seedling | Cold (4C) | 1087.85 | HC |
| SRR3140956 | leaf | "45C, 24h" | 266.49 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 28.28 | HC |
| SRR3140953 | leaf | "45C, 0h" | 290.14 | HC |
| SRR6810102 | seedling | seedling | 3407.54 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 3288.80 | HC |
| SRR10956502 | panicle | WT | 336.15 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 31429.62 | HC |
| SRR10956501 | panicle | WT | 357.43 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 3391.50 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 473.70 | HC |
| SRR8258048 | leaf_sheath | R_bph | 6322.46 | HC |
| SRR1740023 | seedling | IR64-Control | 136.01 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 11295.44 | HC |
| SRR1740025 | seedling | PK-Control | 129.55 | HC |
| SRR1740024 | seedling | N22-Control | 98.29 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 1060.13 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 1029.78 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 26.67 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 25.64 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 3124.98 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 88.78 | HC |
| SRR1654490 | leaf | wild type | 47052.98 | HC |
| SRR3110557 | shoot | shoot treated | 53201.28 | HC |
| SRR5940086 | panicle | Wild type | 633.72 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 476.35 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 307.28 | HC |
| SRR8258051 | leaf_sheath | R_bph | 6413.31 | HC |
| SRR504362 | leaf | NPB X 93-11 | 14161.57 | HC |