| SRR1849773 | leaf | Control 120min | 439.09 | HC |
| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 1000.83 | HC |
| SRR3140955 | leaf | "45C, 12h" | 34.04 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 1734.89 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 462.73 | HC |
| SRR8258050 | leaf_sheath | R_bph | 1140.78 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 3292.94 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 1172.73 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 1126.26 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 962.80 | HC |
| SRR10690152 | leaf | IRBB5_0h | 3280.72 | HC |
| SRR6810106 | panicle | panicle | 132.74 | HC |
| SRR7058097 | leaf | rice_mock | 3937.26 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 675.23 | HC |
| SRR7058098 | leaf | rice_RSV | 2098.47 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 2456.72 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 539.78 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 242.33 | HC |
| SRR2154077 | seedling | KDM105_seedling | 241.09 | HC |
| SRR2154074 | seed | Nipponbare_seed | 56.81 | HC |
| SRR10690151 | leaf | IRBB5_0h | 3396.26 | HC |
| SRR2154072 | seed | Rathuwee_seed | 28.34 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 72.78 | HC |
| SRR2154070 | seed | Guangluai4_seed | 52.76 | HC |
| SRR2154071 | seed | KDM105_seed | 12.20 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 38.21 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2495.00 | HC |
| SRR1061625 | panicle | Heat Stress | 518.01 | HC |
| SRR1061624 | panicle | Normal | 1440.52 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 428.54 | HC |
| SRR1061622 | flag_leaf | Normal | 590.98 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 835.07 | HC |
| SRR1061620 | flag_leaf | Normal | 714.00 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2055.75 | HC |
| SRR10704058 | leaf | Glyphosate | 338.23 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 2541.66 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 594.44 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 4494.10 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 120.21 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 52.20 | HC |
| SRR1013787 | panicle | PA64s_PA | 1167.53 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 99.52 | HC |
| SRR504363 | leaf | 93-11 X NPB | 832.78 | HC |
| SRR1013789 | panicle | 93-11_PA | 433.45 | HC |
| SRR1013788 | panicle | LYP9_PA | 539.61 | HC |
| SRR9070101 | shoot_base | WT_base | 275.53 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 586.80 | HC |
| SRR6810105 | panicle | panicle | 115.10 | HC |
| SRR089619 | panicle | control | 155.33 | HC |
| SRR447134 | shoot | As(III) 80 uM | 112.46 | HC |
| SRR447133 | shoot | As(III) 20 uM | 79.71 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 214.12 | HC |
| SRR1849765 | leaf | Control 30min | 427.60 | HC |
| SRR1849767 | leaf | Control 30min | 495.52 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 90.38 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 513.44 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 33.52 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 1534.49 | HC |
| SRR6498701 | leaf | "WT, Control" | 1215.83 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 1457.54 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 116.25 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 1818.37 | HC |
| SRR3203907 | leaf | WT | 1386.76 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 1169.66 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 1233.92 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 699.64 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 846.66 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 1871.06 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 476.33 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1236.12 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 1467.25 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1357.76 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 835.45 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 1727.94 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 107.72 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 5464.30 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 6638.09 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5809.89 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 169.33 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 395.41 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 564.36 | HC |
| SRR1849772 | leaf | Control 120min | 425.62 | HC |
| SRR1849771 | leaf | Control 120min | 539.51 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 455.12 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 772.19 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 363.22 | HC |
| SRR3130370 | leaf | control 8 hour | 871.67 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 1192.40 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 375.06 | HC |
| SRR7058096 | leaf | rice_mock | 3635.19 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 78.64 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 97.23 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 266.41 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 2248.24 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3374.47 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 2581.89 | HC |
| SRR6365689 | seedling | Wild type | 83.67 | HC |
| SRR447136 | shoot | As(III) 80 uM | 170.77 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 4505.15 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 4009.01 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 1962.62 | HC |
| SRR10704060 | leaf | Glyphosate | 208.72 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 3603.68 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 486.33 | HC |
| SRR2154075 | seed | Taipei309_seed | 33.57 | HC |
| SRR3140952 | leaf | "45C, 0h" | 56.26 | HC |
| SRR976171 | lamina_joint | wild type | 627.29 | HC |
| SRR089774 | panicle | wild-type | 13.29 | HC |
| SRR089772 | panicle | wild-type | 13.74 | HC |
| SRR4098209 | leaf | No treatment | 37.94 | HC |
| SRR3130369 | leaf | control 8 hour | 993.18 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 813.47 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 5316.82 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5467.86 | HC |
| SRR9070100 | shoot_base | WT_base | 313.16 | HC |
| SRR4098205 | seedling | Heat (50C) | 62.44 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 392.38 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 4336.16 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 4035.78 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 5470.87 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 3738.69 | HC |
| SRR3130365 | leaf | control 0 hour | 1552.34 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 3589.74 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 683.84 | HC |
| SRR3130366 | leaf | control 0 hour | 884.64 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 143.23 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 138.86 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 123.34 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 88.15 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 69.42 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 72.02 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 130.72 | HC |
| SRR2862364 | leaf | mock leaf cells | 95.27 | HC |
| SRR2862365 | leaf | mock leaf cells | 73.03 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 247.96 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 102.70 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 63.85 | HC |
| SRR2862363 | leaf | mock leaf cells | 210.13 | HC |
| SRR8649147 | panicle | panicle tissue | 5654.68 | HC |
| SRR4098207 | panicle | No treatment | 29.15 | HC |
| SRR10704055 | leaf | CK | 279.79 | HC |
| SRR10704057 | leaf | CK | 910.02 | HC |
| SRR10704056 | leaf | CK | 339.27 | HC |
| SRR10704059 | leaf | Glyphosate | 85.70 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 525.58 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 3346.47 | HC |
| SRR9070102 | shoot_base | WT_base | 182.28 | HC |
| SRR6498699 | leaf | "WT, Control" | 1285.27 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 207.85 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 314.39 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 5507.68 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 2556.29 | HC |
| SRR10690144 | leaf | IR24_0h | 5221.21 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 3084.61 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 2924.47 | HC |
| SRR10690143 | leaf | IR24_0h | 4861.52 | HC |
| SRR10690142 | leaf | IR24_0h | 5153.04 | HC |
| SRR2646852 | panicle | FP | 4814.13 | HC |
| SRR2646853 | panicle | FP | 4944.64 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1480.80 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 4367.99 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 2131.48 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 2594.64 | HC |
| SRR2646854 | panicle | SP | 4773.41 | HC |
| SRR2646855 | panicle | SP | 4307.52 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 1543.43 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 584.06 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 834.06 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 272.17 | HC |
| SRR4098203 | seedling | No treatment | 36.47 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 582.57 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 515.78 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 677.33 | HC |
| SRR6365690 | seedling | Wild type | 90.83 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 397.07 | HC |
| SRR6365692 | panicle | Wild type | 235.36 | HC |
| SRR6365693 | panicle | Wild type | 591.62 | HC |
| SRR6365694 | panicle | Wild type | 569.97 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 32.89 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 1558.51 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 608.33 | HC |
| SRR6810101 | seedling | seedling | 721.83 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 604.20 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 690.85 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 591.75 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 228.22 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 799.46 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 1135.54 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 447.05 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 136.08 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 663.90 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2362.24 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2863.59 | HC |
| SRR6365691 | panicle | Wild type | 245.33 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 1336.11 | HC |
| SRR10690153 | leaf | IRBB5_0h | 4243.63 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 712.33 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 1841.34 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 736.83 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2702.87 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 619.52 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 422.29 | HC |
| SRR3110556 | shoot | shoot control | 751.21 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 4020.77 | HC |
| SRR1061616 | panicle | Normal | 361.17 | HC |
| SRR1061617 | panicle | Heat Stress | 1035.08 | HC |
| SRR1061614 | panicle | Normal | 461.35 | HC |
| SRR1061615 | panicle | Heat Stress | 1293.13 | HC |
| SRR1061612 | panicle | Normal | 781.85 | HC |
| SRR1061613 | panicle | Heat Stress | 1014.36 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 901.61 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 5113.18 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 79.59 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 351.48 | HC |
| SRR1061618 | flag_leaf | Normal | 403.67 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 404.46 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 77.58 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 132.61 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6098.00 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 613.83 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 554.74 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 548.21 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 1657.52 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 6125.38 | HC |
| SRR3140954 | leaf | "45C, 12h" | 165.68 | HC |
| SRR089621 | panicle | cold | 215.55 | HC |
| SRR089620 | panicle | drought | 175.64 | HC |
| SRR3140957 | leaf | "45C, 24h" | 425.22 | HC |
| SRR089622 | panicle | salt | 100.21 | HC |
| SRR504360 | leaf | Nipponbare | 523.43 | HC |
| SRR504361 | leaf | Nov-93 | 1118.35 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 1205.05 | HC |
| SRR2544786 | embryo | dry seed | 610.53 | HC |
| SRR4098172 | seedling | Cold (4C) | 48.57 | HC |
| SRR3140956 | leaf | "45C, 24h" | 401.69 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 4009.04 | HC |
| SRR3140953 | leaf | "45C, 0h" | 69.33 | HC |
| SRR6810102 | seedling | seedling | 810.24 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 666.92 | HC |
| SRR10956502 | panicle | WT | 1038.09 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 57.29 | HC |
| SRR10956501 | panicle | WT | 1028.39 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 933.88 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 1550.04 | HC |
| SRR8258048 | leaf_sheath | R_bph | 1052.93 | HC |
| SRR1740023 | seedling | IR64-Control | 276.86 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 180.56 | HC |
| SRR1740025 | seedling | PK-Control | 200.58 | HC |
| SRR1740024 | seedling | N22-Control | 100.22 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 2592.18 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 2842.14 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 5921.12 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2303.24 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 1131.16 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 1162.46 | HC |
| SRR1654490 | leaf | wild type | 1226.31 | HC |
| SRR3110557 | shoot | shoot treated | 286.29 | HC |
| SRR5940086 | panicle | Wild type | 1608.54 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 41.82 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 47.07 | HC |
| SRR8258051 | leaf_sheath | R_bph | 941.62 | HC |
| SRR504362 | leaf | NPB X 93-11 | 480.25 | HC |