| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 320.22 | HC |
| SRR3140955 | leaf | "45C, 12h" | 39.08 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 586.33 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 171.88 | HC |
| SRR8258050 | leaf_sheath | R_bph | 405.81 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 21862.24 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 401.93 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 363.45 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 325.50 | HC |
| SRR10690152 | leaf | IRBB5_0h | 1711.65 | HC |
| SRR6810106 | panicle | panicle | 117.86 | HC |
| SRR7058097 | leaf | rice_mock | 1006.94 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 90.40 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 530.55 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 147.75 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 813.95 | HC |
| SRR2154077 | seedling | KDM105_seedling | 876.24 | HC |
| SRR2154074 | seed | Nipponbare_seed | 405.12 | HC |
| SRR10690151 | leaf | IRBB5_0h | 1538.16 | HC |
| SRR2154072 | seed | Rathuwee_seed | 162.94 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 399.30 | HC |
| SRR2154070 | seed | Guangluai4_seed | 487.00 | HC |
| SRR2154071 | seed | KDM105_seed | 167.32 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 120.48 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 544.35 | HC |
| SRR1061625 | panicle | Heat Stress | 3249.67 | HC |
| SRR1061624 | panicle | Normal | 4890.86 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 3372.43 | HC |
| SRR1061622 | flag_leaf | Normal | 5326.06 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 11269.02 | HC |
| SRR1061620 | flag_leaf | Normal | 10520.04 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 756.43 | HC |
| SRR10704058 | leaf | Glyphosate | 508.99 | HC |
| SRR447128 | root | As(III) 20 uM | 348.13 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 726.90 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 211.58 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2570.21 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 721.03 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 476.61 | HC |
| SRR1013787 | panicle | PA64s_PA | 4899.48 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 687.35 | HC |
| SRR504363 | leaf | 93-11 X NPB | 2312.72 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 24.84 | HC |
| SRR1013789 | panicle | 93-11_PA | 1563.96 | HC |
| SRR1013788 | panicle | LYP9_PA | 2013.87 | HC |
| SRR9070101 | shoot_base | WT_base | 230.70 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 2273.03 | HC |
| SRR6810105 | panicle | panicle | 103.44 | HC |
| SRR089619 | panicle | control | 222.66 | HC |
| SRR447135 | shoot | As(III) 20 uM | 153.98 | HC |
| SRR447134 | shoot | As(III) 80 uM | 174.27 | HC |
| SRR447133 | shoot | As(III) 20 uM | 89.48 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 118.00 | HC |
| SRR447131 | root | As(III) 80 uM | 576.53 | HC |
| SRR447130 | root | As(III) 20 uM | 1147.59 | HC |
| SRR1849765 | leaf | Control 30min | 6667.43 | HC |
| SRR1849767 | leaf | Control 30min | 5170.24 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1200.94 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 6428.76 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 958.24 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 11909.51 | HC |
| SRR6498701 | leaf | "WT, Control" | 14495.89 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 18049.45 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 427.18 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 787.90 | HC |
| SRR3203907 | leaf | WT | 3230.44 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 10001.00 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 411.64 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 171.10 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 116.35 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 163.93 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 56.58 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 125.07 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 292.69 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 260.98 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 188.37 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 341.87 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 384.15 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2969.23 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 3644.78 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 3186.22 | HC |
| SRR447129 | root | As(III) 80 uM | 163.85 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 1695.65 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 5726.20 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 7287.77 | HC |
| SRR1849773 | leaf | Control 120min | 4694.90 | HC |
| SRR1849772 | leaf | Control 120min | 5408.57 | HC |
| SRR1849771 | leaf | Control 120min | 6322.51 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 5321.63 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 2566.29 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 987.90 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 96.71 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 102.52 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 1258.47 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 1085.99 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 1993.24 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 24717.58 | HC |
| SRR6365689 | seedling | Wild type | 321.71 | HC |
| SRR447136 | shoot | As(III) 80 uM | 148.07 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2440.51 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 30078.61 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 984.27 | HC |
| SRR10704060 | leaf | Glyphosate | 330.35 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 22072.91 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 179.03 | HC |
| SRR2154075 | seed | Taipei309_seed | 404.34 | HC |
| SRR3140952 | leaf | "45C, 0h" | 119.52 | HC |
| SRR976171 | lamina_joint | wild type | 544.74 | HC |
| SRR4098208 | root | No treatment | 343.48 | HC |
| SRR089774 | panicle | wild-type | 42.06 | HC |
| SRR089772 | panicle | wild-type | 42.03 | HC |
| SRR4098209 | leaf | No treatment | 225.69 | HC |
| SRR3130369 | leaf | control 8 hour | 2641.31 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 2241.63 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2355.80 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 3218.48 | HC |
| SRR9070100 | shoot_base | WT_base | 215.94 | HC |
| SRR4098205 | seedling | Heat (50C) | 186.69 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 842.68 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2528.79 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2605.73 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 3154.85 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2509.66 | HC |
| SRR3130365 | leaf | control 0 hour | 4896.00 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2012.91 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 1713.67 | HC |
| SRR3130366 | leaf | control 0 hour | 2500.38 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 143.13 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 145.99 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 88.83 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 90.92 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 54.36 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 57.41 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 109.15 | HC |
| SRR2862364 | leaf | mock leaf cells | 208.46 | HC |
| SRR2862365 | leaf | mock leaf cells | 207.36 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 745.23 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 236.59 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 340.82 | HC |
| SRR2862363 | leaf | mock leaf cells | 594.34 | HC |
| SRR8649147 | panicle | panicle tissue | 6099.16 | HC |
| SRR4098207 | panicle | No treatment | 142.52 | HC |
| SRR10704055 | leaf | CK | 429.85 | HC |
| SRR10704057 | leaf | CK | 1090.21 | HC |
| SRR10704056 | leaf | CK | 520.27 | HC |
| SRR10704059 | leaf | Glyphosate | 103.63 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 4967.53 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 2114.01 | HC |
| SRR9070102 | shoot_base | WT_base | 186.85 | HC |
| SRR6498699 | leaf | "WT, Control" | 14391.79 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 849.71 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 1091.69 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 2993.33 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1073.83 | HC |
| SRR10690144 | leaf | IR24_0h | 1198.98 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 615.13 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 863.75 | HC |
| SRR10690143 | leaf | IR24_0h | 1657.74 | HC |
| SRR10690142 | leaf | IR24_0h | 1736.49 | HC |
| SRR2646852 | panicle | FP | 3106.35 | HC |
| SRR2646853 | panicle | FP | 3566.11 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1328.71 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 2857.70 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 677.46 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 688.72 | HC |
| SRR2646854 | panicle | SP | 2748.78 | HC |
| SRR2646855 | panicle | SP | 2836.08 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 594.10 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 165.90 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 286.58 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 93.60 | HC |
| SRR4098203 | seedling | No treatment | 250.55 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 207.16 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 175.00 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 180.02 | HC |
| SRR6365690 | seedling | Wild type | 142.24 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 127.96 | HC |
| SRR6365692 | panicle | Wild type | 234.94 | HC |
| SRR6365693 | panicle | Wild type | 576.60 | HC |
| SRR6365694 | panicle | Wild type | 574.64 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1029.25 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 548.16 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 348.34 | HC |
| SRR6810101 | seedling | seedling | 834.38 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 207.38 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 250.07 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 159.65 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 116.62 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 277.67 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 405.12 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 124.13 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 26.83 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 66.20 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 751.13 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 573.83 | HC |
| SRR1849784 | root | Control 120min | 8178.75 | HC |
| SRR6365691 | panicle | Wild type | 244.90 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 180.67 | HC |
| SRR10690153 | leaf | IRBB5_0h | 1445.68 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 86.63 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 183.87 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 151.94 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 824.18 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 151.41 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 68.95 | HC |
| SRR3110556 | shoot | shoot control | 2438.22 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 848.20 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 2081.64 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 1344.97 | HC |
| SRR1061616 | panicle | Normal | 861.49 | HC |
| SRR1061617 | panicle | Heat Stress | 3214.80 | HC |
| SRR1061614 | panicle | Normal | 1722.95 | HC |
| SRR1061615 | panicle | Heat Stress | 3357.01 | HC |
| SRR1061612 | panicle | Normal | 3188.42 | HC |
| SRR1061613 | panicle | Heat Stress | 3169.52 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 540.49 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2529.90 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 585.63 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 830.80 | HC |
| SRR1061618 | flag_leaf | Normal | 7160.65 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 10339.61 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 47.28 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2341.86 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 547.90 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 211.70 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 174.96 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 178.14 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 2715.05 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2564.92 | HC |
| SRR3140954 | leaf | "45C, 12h" | 175.14 | HC |
| SRR089621 | panicle | cold | 361.66 | HC |
| SRR089620 | panicle | drought | 259.79 | HC |
| SRR3140957 | leaf | "45C, 24h" | 532.18 | HC |
| SRR089622 | panicle | salt | 134.13 | HC |
| SRR504360 | leaf | Nipponbare | 1243.52 | HC |
| SRR504361 | leaf | Nov-93 | 2722.23 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 2142.95 | HC |
| SRR2544786 | embryo | dry seed | 1197.32 | HC |
| SRR4098172 | seedling | Cold (4C) | 176.13 | HC |
| SRR3140956 | leaf | "45C, 24h" | 405.20 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 2019.20 | HC |
| SRR3140953 | leaf | "45C, 0h" | 156.36 | HC |
| SRR6810102 | seedling | seedling | 1023.67 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 238.51 | HC |
| SRR10956502 | panicle | WT | 1305.18 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 174.60 | HC |
| SRR10956501 | panicle | WT | 1326.71 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 313.43 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 189.91 | HC |
| SRR8258048 | leaf_sheath | R_bph | 311.83 | HC |
| SRR1740023 | seedling | IR64-Control | 1163.78 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 727.32 | HC |
| SRR1740025 | seedling | PK-Control | 925.23 | HC |
| SRR1740024 | seedling | N22-Control | 765.86 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 21356.82 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 27249.29 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 3020.91 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1677.26 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 426.79 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 607.40 | HC |
| SRR1654490 | leaf | wild type | 1596.52 | HC |
| SRR3110557 | shoot | shoot treated | 1664.98 | HC |
| SRR5940086 | panicle | Wild type | 5042.32 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 223.28 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 253.83 | HC |
| SRR8258051 | leaf_sheath | R_bph | 361.22 | HC |
| SRR504362 | leaf | NPB X 93-11 | 1021.88 | HC |
| SRR7058098 | leaf | rice_RSV | 809.16 | HC |
| SRR3130370 | leaf | control 8 hour | 2898.20 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 4345.32 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 1348.42 | HC |
| SRR7058096 | leaf | rice_mock | 921.11 | HC |