| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 4275.50 | HC |
| SRR3140955 | leaf | "45C, 12h" | 169.62 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 6234.59 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 3417.83 | HC |
| SRR8258050 | leaf_sheath | R_bph | 4173.11 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 68418.81 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 4583.92 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 5197.75 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 5822.21 | HC |
| SRR10690152 | leaf | IRBB5_0h | 31740.56 | HC |
| SRR6810106 | panicle | panicle | 6000.59 | HC |
| SRR7058097 | leaf | rice_mock | 8411.62 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 50.64 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 758.20 | HC |
| SRR7058098 | leaf | rice_RSV | 7501.13 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 3952.05 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 3070.65 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 2397.66 | HC |
| SRR2154077 | seedling | KDM105_seedling | 2739.26 | HC |
| SRR2154074 | seed | Nipponbare_seed | 2554.65 | HC |
| SRR10690151 | leaf | IRBB5_0h | 22944.72 | HC |
| SRR2154072 | seed | Rathuwee_seed | 1460.43 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 2851.64 | HC |
| SRR2154070 | seed | Guangluai4_seed | 3011.38 | HC |
| SRR2154071 | seed | KDM105_seed | 865.18 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 381.12 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5049.98 | HC |
| SRR1061625 | panicle | Heat Stress | 14515.81 | HC |
| SRR1061624 | panicle | Normal | 40452.58 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 19854.93 | HC |
| SRR1061622 | flag_leaf | Normal | 33916.90 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 47812.92 | HC |
| SRR1061620 | flag_leaf | Normal | 36653.82 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 12342.72 | HC |
| SRR10704058 | leaf | Glyphosate | 8164.13 | HC |
| SRR447128 | root | As(III) 20 uM | 1905.90 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 14607.63 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 8754.93 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 13073.02 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 1736.08 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 1157.83 | HC |
| SRR1013787 | panicle | PA64s_PA | 14813.35 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 1701.98 | HC |
| SRR504363 | leaf | 93-11 X NPB | 5854.24 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 361.45 | HC |
| SRR1013789 | panicle | 93-11_PA | 5014.60 | HC |
| SRR1013788 | panicle | LYP9_PA | 6513.15 | HC |
| SRR9070101 | shoot_base | WT_base | 750.37 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 5495.72 | HC |
| SRR6810105 | panicle | panicle | 5349.19 | HC |
| SRR089619 | panicle | control | 638.83 | HC |
| SRR447135 | shoot | As(III) 20 uM | 200.77 | HC |
| SRR447134 | shoot | As(III) 80 uM | 589.60 | HC |
| SRR447133 | shoot | As(III) 20 uM | 398.89 | HC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 815.22 | HC |
| SRR447131 | root | As(III) 80 uM | 653.16 | HC |
| SRR447130 | root | As(III) 20 uM | 4539.35 | HC |
| SRR1849765 | leaf | Control 30min | 13086.12 | HC |
| SRR1849767 | leaf | Control 30min | 15412.31 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 2627.17 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 15942.47 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 1475.03 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 55252.42 | HC |
| SRR6498701 | leaf | "WT, Control" | 49012.85 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 85896.88 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 1909.04 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 12182.22 | HC |
| SRR3203907 | leaf | WT | 12997.98 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 37155.05 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 3263.63 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 1622.32 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 1022.88 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 2295.84 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 416.88 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 1146.23 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 1845.97 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 1497.61 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 1621.72 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 2833.31 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 1172.11 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 15623.78 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 17884.52 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 21765.80 | HC |
| SRR447129 | root | As(III) 80 uM | 2317.10 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 4967.94 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 13728.65 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 16690.85 | HC |
| SRR1849773 | leaf | Control 120min | 12534.19 | HC |
| SRR1849772 | leaf | Control 120min | 15726.18 | HC |
| SRR1849771 | leaf | Control 120min | 15866.78 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 13536.38 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 5808.20 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 2620.18 | HC |
| SRR3130370 | leaf | control 8 hour | 7071.85 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 10107.03 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 3167.28 | HC |
| SRR7058096 | leaf | rice_mock | 8867.64 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 1519.30 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 1733.02 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 3222.93 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 18283.69 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 7720.72 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 66984.32 | HC |
| SRR6365689 | seedling | Wild type | 1430.89 | HC |
| SRR447136 | shoot | As(III) 80 uM | 817.67 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 6974.26 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 92059.92 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 15791.20 | HC |
| SRR10704060 | leaf | Glyphosate | 4109.40 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 67668.36 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 6987.12 | HC |
| SRR2154075 | seed | Taipei309_seed | 1693.84 | HC |
| SRR3140952 | leaf | "45C, 0h" | 699.76 | HC |
| SRR976171 | lamina_joint | wild type | 3148.04 | HC |
| SRR4098208 | root | No treatment | 2516.01 | HC |
| SRR089774 | panicle | wild-type | 53.87 | HC |
| SRR089772 | panicle | wild-type | 71.93 | HC |
| SRR4098209 | leaf | No treatment | 542.81 | HC |
| SRR3130369 | leaf | control 8 hour | 6315.52 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 5720.66 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 6429.30 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 14240.81 | HC |
| SRR9070100 | shoot_base | WT_base | 800.15 | HC |
| SRR4098205 | seedling | Heat (50C) | 435.70 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 22001.70 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 7989.52 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12768.38 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 13183.24 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 12452.94 | HC |
| SRR3130365 | leaf | control 0 hour | 12880.03 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 8006.12 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 4627.79 | HC |
| SRR3130366 | leaf | control 0 hour | 6149.59 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 4108.23 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 4169.52 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 2675.73 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 2193.74 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 1089.25 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 1098.25 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 2812.49 | HC |
| SRR2862364 | leaf | mock leaf cells | 985.48 | HC |
| SRR2862365 | leaf | mock leaf cells | 919.68 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 3124.15 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 1005.84 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1173.07 | HC |
| SRR2862363 | leaf | mock leaf cells | 2489.55 | HC |
| SRR8649147 | panicle | panicle tissue | 77552.98 | HC |
| SRR4098207 | panicle | No treatment | 374.95 | HC |
| SRR10704055 | leaf | CK | 3878.52 | HC |
| SRR10704057 | leaf | CK | 12212.91 | HC |
| SRR10704056 | leaf | CK | 4230.84 | HC |
| SRR10704059 | leaf | Glyphosate | 1894.36 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 28832.02 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 6180.30 | HC |
| SRR9070102 | shoot_base | WT_base | 559.74 | HC |
| SRR6498699 | leaf | "WT, Control" | 45650.40 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 2309.87 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 3537.43 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 13580.37 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 15949.35 | HC |
| SRR10690144 | leaf | IR24_0h | 7155.07 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 4852.94 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 10616.09 | HC |
| SRR10690143 | leaf | IR24_0h | 21046.97 | HC |
| SRR10690142 | leaf | IR24_0h | 21014.37 | HC |
| SRR2646852 | panicle | FP | 47448.43 | HC |
| SRR2646853 | panicle | FP | 23361.80 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 8479.97 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 13145.62 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 9888.67 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 11085.39 | HC |
| SRR2646854 | panicle | SP | 25251.85 | HC |
| SRR2646855 | panicle | SP | 17667.16 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 8513.89 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 5759.58 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 14878.26 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 2160.37 | HC |
| SRR4098203 | seedling | No treatment | 405.01 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 7398.47 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 5563.27 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 6360.61 | HC |
| SRR6365690 | seedling | Wild type | 1094.34 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 1881.73 | HC |
| SRR6365692 | panicle | Wild type | 1702.09 | HC |
| SRR6365693 | panicle | Wild type | 12013.92 | HC |
| SRR6365694 | panicle | Wild type | 11680.25 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1507.49 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 7040.04 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 13712.56 | HC |
| SRR6810101 | seedling | seedling | 20388.08 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 3212.64 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 3688.96 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 5507.73 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 4652.88 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 3028.43 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 6114.99 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 2418.22 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 322.51 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1118.63 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 12635.74 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 5143.41 | HC |
| SRR1849784 | root | Control 120min | 14150.43 | HC |
| SRR6365691 | panicle | Wild type | 1829.70 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 2092.70 | HC |
| SRR10690153 | leaf | IRBB5_0h | 12165.38 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 929.19 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 3460.22 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 1583.82 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 16856.45 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 2162.52 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 862.53 | HC |
| SRR3110556 | shoot | shoot control | 8546.68 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 8231.86 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 5188.55 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 10567.72 | HC |
| SRR1061616 | panicle | Normal | 13312.60 | HC |
| SRR1061617 | panicle | Heat Stress | 34692.40 | HC |
| SRR1061614 | panicle | Normal | 19691.84 | HC |
| SRR1061615 | panicle | Heat Stress | 44386.43 | HC |
| SRR1061612 | panicle | Normal | 16794.16 | HC |
| SRR1061613 | panicle | Heat Stress | 19740.19 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 16648.57 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 11989.33 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2854.78 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 19487.36 | HC |
| SRR1061618 | flag_leaf | Normal | 26651.36 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 24935.47 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 190.91 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 452.53 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 7304.49 | HC |
| SRR447127 | root | control for As(III) 20/80 uM | 2872.73 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 3005.38 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 2760.64 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 2845.43 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 43319.70 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 7659.44 | HC |
| SRR3140954 | leaf | "45C, 12h" | 1232.28 | HC |
| SRR089621 | panicle | cold | 1189.35 | HC |
| SRR089620 | panicle | drought | 684.93 | HC |
| SRR3140957 | leaf | "45C, 24h" | 2763.61 | HC |
| SRR089622 | panicle | salt | 353.83 | HC |
| SRR504360 | leaf | Nipponbare | 3582.25 | HC |
| SRR504361 | leaf | Nov-93 | 6033.09 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 37255.87 | HC |
| SRR2544786 | embryo | dry seed | 12745.04 | HC |
| SRR4098172 | seedling | Cold (4C) | 701.45 | HC |
| SRR3140956 | leaf | "45C, 24h" | 2740.89 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 10682.93 | HC |
| SRR3140953 | leaf | "45C, 0h" | 1014.71 | HC |
| SRR6810102 | seedling | seedling | 25959.72 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 3395.31 | HC |
| SRR10956502 | panicle | WT | 16495.24 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 1003.36 | HC |
| SRR10956501 | panicle | WT | 17043.78 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 3710.13 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 3110.82 | HC |
| SRR8258048 | leaf_sheath | R_bph | 4310.00 | HC |
| SRR1740023 | seedling | IR64-Control | 2145.44 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 2253.45 | HC |
| SRR1740025 | seedling | PK-Control | 1728.76 | HC |
| SRR1740024 | seedling | N22-Control | 1656.10 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 71253.70 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 75429.32 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 12130.67 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 21519.78 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 4190.16 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 11860.68 | HC |
| SRR1654490 | leaf | wild type | 15703.47 | HC |
| SRR3110557 | shoot | shoot treated | 6968.00 | HC |
| SRR5940086 | panicle | Wild type | 40702.64 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 2121.82 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 2682.12 | HC |
| SRR8258051 | leaf_sheath | R_bph | 4010.98 | HC |
| SRR504362 | leaf | NPB X 93-11 | 2993.72 | HC |